Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29693 | 89302;89303;89304 | chr2:178554034;178554033;178554032 | chr2:179418761;179418760;179418759 |
N2AB | 28052 | 84379;84380;84381 | chr2:178554034;178554033;178554032 | chr2:179418761;179418760;179418759 |
N2A | 27125 | 81598;81599;81600 | chr2:178554034;178554033;178554032 | chr2:179418761;179418760;179418759 |
N2B | 20628 | 62107;62108;62109 | chr2:178554034;178554033;178554032 | chr2:179418761;179418760;179418759 |
Novex-1 | 20753 | 62482;62483;62484 | chr2:178554034;178554033;178554032 | chr2:179418761;179418760;179418759 |
Novex-2 | 20820 | 62683;62684;62685 | chr2:178554034;178554033;178554032 | chr2:179418761;179418760;179418759 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs778478943 | -0.64 | 0.002 | N | 0.365 | 0.125 | 0.0806252709748 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
Q/H | rs778478943 | -0.64 | 0.002 | N | 0.365 | 0.125 | 0.0806252709748 | gnomAD-4.0.0 | 4.77395E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57383E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3516 | ambiguous | 0.3801 | ambiguous | -0.335 | Destabilizing | 0.157 | N | 0.475 | neutral | None | None | None | None | I |
Q/C | 0.543 | ambiguous | 0.5736 | pathogenic | -0.133 | Destabilizing | 0.968 | D | 0.733 | prob.delet. | None | None | None | None | I |
Q/D | 0.8438 | likely_pathogenic | 0.8886 | pathogenic | -1.002 | Destabilizing | 0.157 | N | 0.407 | neutral | None | None | None | None | I |
Q/E | 0.1623 | likely_benign | 0.2024 | benign | -0.748 | Destabilizing | 0.001 | N | 0.184 | neutral | N | 0.443655756 | None | None | I |
Q/F | 0.6769 | likely_pathogenic | 0.6959 | pathogenic | -0.013 | Destabilizing | 0.726 | D | 0.695 | prob.neutral | None | None | None | None | I |
Q/G | 0.5091 | ambiguous | 0.5987 | pathogenic | -0.761 | Destabilizing | 0.272 | N | 0.527 | neutral | None | None | None | None | I |
Q/H | 0.2912 | likely_benign | 0.3611 | ambiguous | -0.284 | Destabilizing | 0.002 | N | 0.365 | neutral | N | 0.358114285 | None | None | I |
Q/I | 0.4865 | ambiguous | 0.4908 | ambiguous | 0.802 | Stabilizing | 0.726 | D | 0.679 | prob.neutral | None | None | None | None | I |
Q/K | 0.2211 | likely_benign | 0.2501 | benign | 0.103 | Stabilizing | 0.124 | N | 0.431 | neutral | N | 0.462241517 | None | None | I |
Q/L | 0.1703 | likely_benign | 0.182 | benign | 0.802 | Stabilizing | 0.22 | N | 0.539 | neutral | N | 0.354148473 | None | None | I |
Q/M | 0.376 | ambiguous | 0.3481 | ambiguous | 0.733 | Stabilizing | 0.89 | D | 0.483 | neutral | None | None | None | None | I |
Q/N | 0.572 | likely_pathogenic | 0.6434 | pathogenic | -0.972 | Destabilizing | 0.157 | N | 0.396 | neutral | None | None | None | None | I |
Q/P | 0.8719 | likely_pathogenic | 0.9468 | pathogenic | 0.452 | Stabilizing | 0.667 | D | 0.537 | neutral | N | 0.480827278 | None | None | I |
Q/R | 0.233 | likely_benign | 0.2766 | benign | -0.067 | Destabilizing | 0.124 | N | 0.405 | neutral | N | 0.451024446 | None | None | I |
Q/S | 0.4939 | ambiguous | 0.5271 | ambiguous | -1.101 | Destabilizing | 0.157 | N | 0.398 | neutral | None | None | None | None | I |
Q/T | 0.4328 | ambiguous | 0.4474 | ambiguous | -0.632 | Destabilizing | 0.272 | N | 0.488 | neutral | None | None | None | None | I |
Q/V | 0.3095 | likely_benign | 0.2978 | benign | 0.452 | Stabilizing | 0.567 | D | 0.565 | neutral | None | None | None | None | I |
Q/W | 0.6817 | likely_pathogenic | 0.756 | pathogenic | -0.046 | Destabilizing | 0.968 | D | 0.691 | prob.neutral | None | None | None | None | I |
Q/Y | 0.4488 | ambiguous | 0.4988 | ambiguous | 0.39 | Stabilizing | 0.396 | N | 0.558 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.