Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29699 | 89320;89321;89322 | chr2:178554016;178554015;178554014 | chr2:179418743;179418742;179418741 |
N2AB | 28058 | 84397;84398;84399 | chr2:178554016;178554015;178554014 | chr2:179418743;179418742;179418741 |
N2A | 27131 | 81616;81617;81618 | chr2:178554016;178554015;178554014 | chr2:179418743;179418742;179418741 |
N2B | 20634 | 62125;62126;62127 | chr2:178554016;178554015;178554014 | chr2:179418743;179418742;179418741 |
Novex-1 | 20759 | 62500;62501;62502 | chr2:178554016;178554015;178554014 | chr2:179418743;179418742;179418741 |
Novex-2 | 20826 | 62701;62702;62703 | chr2:178554016;178554015;178554014 | chr2:179418743;179418742;179418741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.201 | N | 0.351 | 0.103 | 0.12205267543 | gnomAD-4.0.0 | 6.84309E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9947E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0727 | likely_benign | 0.085 | benign | -0.721 | Destabilizing | 0.201 | N | 0.351 | neutral | N | 0.495431371 | None | None | N |
T/C | 0.2955 | likely_benign | 0.3772 | ambiguous | -0.368 | Destabilizing | 0.992 | D | 0.397 | neutral | None | None | None | None | N |
T/D | 0.4544 | ambiguous | 0.6066 | pathogenic | 0.257 | Stabilizing | 0.85 | D | 0.415 | neutral | None | None | None | None | N |
T/E | 0.3231 | likely_benign | 0.4208 | ambiguous | 0.219 | Stabilizing | 0.617 | D | 0.416 | neutral | None | None | None | None | N |
T/F | 0.1775 | likely_benign | 0.2442 | benign | -1.021 | Destabilizing | 0.85 | D | 0.429 | neutral | None | None | None | None | N |
T/G | 0.203 | likely_benign | 0.2741 | benign | -0.915 | Destabilizing | 0.617 | D | 0.405 | neutral | None | None | None | None | N |
T/H | 0.2187 | likely_benign | 0.285 | benign | -1.129 | Destabilizing | 0.992 | D | 0.416 | neutral | None | None | None | None | N |
T/I | 0.0883 | likely_benign | 0.1147 | benign | -0.312 | Destabilizing | 0.004 | N | 0.218 | neutral | N | 0.420704326 | None | None | N |
T/K | 0.2104 | likely_benign | 0.2616 | benign | -0.472 | Destabilizing | 0.549 | D | 0.412 | neutral | N | 0.467396621 | None | None | N |
T/L | 0.0631 | likely_benign | 0.0762 | benign | -0.312 | Destabilizing | 0.103 | N | 0.417 | neutral | None | None | None | None | N |
T/M | 0.0673 | likely_benign | 0.0749 | benign | -0.065 | Destabilizing | 0.103 | N | 0.403 | neutral | None | None | None | None | N |
T/N | 0.1103 | likely_benign | 0.1472 | benign | -0.303 | Destabilizing | 0.85 | D | 0.39 | neutral | None | None | None | None | N |
T/P | 0.1598 | likely_benign | 0.2407 | benign | -0.417 | Destabilizing | 0.963 | D | 0.422 | neutral | D | 0.524484841 | None | None | N |
T/Q | 0.1898 | likely_benign | 0.2283 | benign | -0.492 | Destabilizing | 0.92 | D | 0.419 | neutral | None | None | None | None | N |
T/R | 0.1809 | likely_benign | 0.2309 | benign | -0.204 | Destabilizing | 0.81 | D | 0.41 | neutral | N | 0.455179472 | None | None | N |
T/S | 0.0986 | likely_benign | 0.1218 | benign | -0.617 | Destabilizing | 0.045 | N | 0.227 | neutral | N | 0.459067926 | None | None | N |
T/V | 0.0792 | likely_benign | 0.0924 | benign | -0.417 | Destabilizing | 0.009 | N | 0.093 | neutral | None | None | None | None | N |
T/W | 0.4648 | ambiguous | 0.5737 | pathogenic | -0.95 | Destabilizing | 0.992 | D | 0.474 | neutral | None | None | None | None | N |
T/Y | 0.2408 | likely_benign | 0.3072 | benign | -0.705 | Destabilizing | 0.92 | D | 0.428 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.