Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29700 | 89323;89324;89325 | chr2:178554013;178554012;178554011 | chr2:179418740;179418739;179418738 |
N2AB | 28059 | 84400;84401;84402 | chr2:178554013;178554012;178554011 | chr2:179418740;179418739;179418738 |
N2A | 27132 | 81619;81620;81621 | chr2:178554013;178554012;178554011 | chr2:179418740;179418739;179418738 |
N2B | 20635 | 62128;62129;62130 | chr2:178554013;178554012;178554011 | chr2:179418740;179418739;179418738 |
Novex-1 | 20760 | 62503;62504;62505 | chr2:178554013;178554012;178554011 | chr2:179418740;179418739;179418738 |
Novex-2 | 20827 | 62704;62705;62706 | chr2:178554013;178554012;178554011 | chr2:179418740;179418739;179418738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1301227457 | 0.21 | 0.999 | N | 0.691 | 0.365 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1301227457 | 0.21 | 0.999 | N | 0.691 | 0.365 | None | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02407E-05 |
E/V | rs763490789 | -0.096 | 1.0 | N | 0.643 | 0.588 | 0.690242091961 | gnomAD-4.0.0 | 2.053E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47802E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2515 | likely_benign | 0.2216 | benign | -0.359 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.514246418 | None | None | N |
E/C | 0.9318 | likely_pathogenic | 0.9172 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
E/D | 0.3876 | ambiguous | 0.3111 | benign | -0.5 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.499641257 | None | None | N |
E/F | 0.945 | likely_pathogenic | 0.9229 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/G | 0.3468 | ambiguous | 0.3034 | benign | -0.558 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.498248905 | None | None | N |
E/H | 0.8324 | likely_pathogenic | 0.7633 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
E/I | 0.6127 | likely_pathogenic | 0.56 | ambiguous | 0.128 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
E/K | 0.3148 | likely_benign | 0.2565 | benign | 0.321 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.481345965 | None | None | N |
E/L | 0.7401 | likely_pathogenic | 0.6882 | pathogenic | 0.128 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
E/M | 0.7385 | likely_pathogenic | 0.6806 | pathogenic | 0.456 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
E/N | 0.5869 | likely_pathogenic | 0.5075 | ambiguous | 0.145 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/P | 0.4954 | ambiguous | 0.4559 | ambiguous | -0.013 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
E/Q | 0.2592 | likely_benign | 0.2157 | benign | 0.143 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | N | 0.485055721 | None | None | N |
E/R | 0.5033 | ambiguous | 0.4186 | ambiguous | 0.333 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/S | 0.4403 | ambiguous | 0.3767 | ambiguous | -0.027 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/T | 0.4805 | ambiguous | 0.4356 | ambiguous | 0.127 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
E/V | 0.4111 | ambiguous | 0.3615 | ambiguous | -0.013 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.501616267 | None | None | N |
E/W | 0.9819 | likely_pathogenic | 0.9695 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Y | 0.9095 | likely_pathogenic | 0.8705 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.