Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29708 | 89347;89348;89349 | chr2:178553989;178553988;178553987 | chr2:179418716;179418715;179418714 |
N2AB | 28067 | 84424;84425;84426 | chr2:178553989;178553988;178553987 | chr2:179418716;179418715;179418714 |
N2A | 27140 | 81643;81644;81645 | chr2:178553989;178553988;178553987 | chr2:179418716;179418715;179418714 |
N2B | 20643 | 62152;62153;62154 | chr2:178553989;178553988;178553987 | chr2:179418716;179418715;179418714 |
Novex-1 | 20768 | 62527;62528;62529 | chr2:178553989;178553988;178553987 | chr2:179418716;179418715;179418714 |
Novex-2 | 20835 | 62728;62729;62730 | chr2:178553989;178553988;178553987 | chr2:179418716;179418715;179418714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.964 | D | 0.816 | 0.761 | 0.906977160548 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.863 | D | 0.597 | 0.587 | 0.815628326125 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6299 | likely_pathogenic | 0.5459 | ambiguous | -2.493 | Highly Destabilizing | 0.046 | N | 0.313 | neutral | D | 0.550175263 | None | None | N |
V/C | 0.9371 | likely_pathogenic | 0.9304 | pathogenic | -1.761 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
V/D | 0.9979 | likely_pathogenic | 0.9984 | pathogenic | -3.2 | Highly Destabilizing | 0.991 | D | 0.881 | deleterious | D | 0.649914155 | None | None | N |
V/E | 0.995 | likely_pathogenic | 0.9958 | pathogenic | -2.882 | Highly Destabilizing | 0.986 | D | 0.833 | deleterious | None | None | None | None | N |
V/F | 0.9566 | likely_pathogenic | 0.958 | pathogenic | -1.231 | Destabilizing | 0.997 | D | 0.771 | deleterious | D | 0.582104586 | None | None | N |
V/G | 0.8853 | likely_pathogenic | 0.891 | pathogenic | -3.075 | Highly Destabilizing | 0.964 | D | 0.816 | deleterious | D | 0.649914155 | None | None | N |
V/H | 0.9988 | likely_pathogenic | 0.9989 | pathogenic | -2.829 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
V/I | 0.1352 | likely_benign | 0.1323 | benign | -0.779 | Destabilizing | 0.863 | D | 0.533 | neutral | N | 0.49279049 | None | None | N |
V/K | 0.9975 | likely_pathogenic | 0.998 | pathogenic | -1.744 | Destabilizing | 0.986 | D | 0.835 | deleterious | None | None | None | None | N |
V/L | 0.8111 | likely_pathogenic | 0.7988 | pathogenic | -0.779 | Destabilizing | 0.863 | D | 0.597 | neutral | D | 0.526533919 | None | None | N |
V/M | 0.8783 | likely_pathogenic | 0.8744 | pathogenic | -1.161 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/N | 0.9903 | likely_pathogenic | 0.9919 | pathogenic | -2.409 | Highly Destabilizing | 0.993 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9951 | likely_pathogenic | 0.995 | pathogenic | -1.336 | Destabilizing | 0.993 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.9946 | likely_pathogenic | 0.9953 | pathogenic | -2.037 | Highly Destabilizing | 0.993 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9926 | likely_pathogenic | 0.9939 | pathogenic | -1.893 | Destabilizing | 0.993 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.92 | likely_pathogenic | 0.9079 | pathogenic | -2.886 | Highly Destabilizing | 0.973 | D | 0.789 | deleterious | None | None | None | None | N |
V/T | 0.8727 | likely_pathogenic | 0.8451 | pathogenic | -2.419 | Highly Destabilizing | 0.953 | D | 0.622 | neutral | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -1.704 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.9954 | likely_pathogenic | 0.996 | pathogenic | -1.503 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.