Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29716 | 89371;89372;89373 | chr2:178553965;178553964;178553963 | chr2:179418692;179418691;179418690 |
N2AB | 28075 | 84448;84449;84450 | chr2:178553965;178553964;178553963 | chr2:179418692;179418691;179418690 |
N2A | 27148 | 81667;81668;81669 | chr2:178553965;178553964;178553963 | chr2:179418692;179418691;179418690 |
N2B | 20651 | 62176;62177;62178 | chr2:178553965;178553964;178553963 | chr2:179418692;179418691;179418690 |
Novex-1 | 20776 | 62551;62552;62553 | chr2:178553965;178553964;178553963 | chr2:179418692;179418691;179418690 |
Novex-2 | 20843 | 62752;62753;62754 | chr2:178553965;178553964;178553963 | chr2:179418692;179418691;179418690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs1482572884 | -0.412 | None | N | 0.29 | 0.094 | 0.144782658237 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 0 | 0 |
Q/P | rs1482572884 | -0.412 | None | N | 0.29 | 0.094 | 0.144782658237 | gnomAD-4.0.0 | 1.60012E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4403E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.131 | likely_benign | 0.1255 | benign | -0.692 | Destabilizing | None | N | 0.286 | neutral | None | None | None | None | I |
Q/C | 0.4442 | ambiguous | 0.4294 | ambiguous | -0.084 | Destabilizing | 0.245 | N | 0.578 | neutral | None | None | None | None | I |
Q/D | 0.4827 | ambiguous | 0.4345 | ambiguous | -0.1 | Destabilizing | 0.009 | N | 0.373 | neutral | None | None | None | None | I |
Q/E | 0.1014 | likely_benign | 0.0879 | benign | -0.005 | Destabilizing | None | N | 0.173 | neutral | N | 0.418407808 | None | None | I |
Q/F | 0.4926 | ambiguous | 0.4716 | ambiguous | -0.41 | Destabilizing | 0.022 | N | 0.563 | neutral | None | None | None | None | I |
Q/G | 0.3278 | likely_benign | 0.3176 | benign | -1.028 | Destabilizing | 0.004 | N | 0.512 | neutral | None | None | None | None | I |
Q/H | 0.207 | likely_benign | 0.1952 | benign | -0.654 | Destabilizing | None | N | 0.222 | neutral | N | 0.469434061 | None | None | I |
Q/I | 0.1886 | likely_benign | 0.169 | benign | 0.156 | Stabilizing | 0.003 | N | 0.555 | neutral | None | None | None | None | I |
Q/K | 0.1097 | likely_benign | 0.0982 | benign | -0.179 | Destabilizing | 0.006 | N | 0.287 | neutral | N | 0.446018484 | None | None | I |
Q/L | 0.0875 | likely_benign | 0.0787 | benign | 0.156 | Stabilizing | None | N | 0.377 | neutral | N | 0.374675674 | None | None | I |
Q/M | 0.1918 | likely_benign | 0.1988 | benign | 0.409 | Stabilizing | 0.001 | N | 0.239 | neutral | None | None | None | None | I |
Q/N | 0.262 | likely_benign | 0.2459 | benign | -0.731 | Destabilizing | 0.009 | N | 0.36 | neutral | None | None | None | None | I |
Q/P | 0.093 | likely_benign | 0.0777 | benign | -0.096 | Destabilizing | None | N | 0.29 | neutral | N | 0.402035633 | None | None | I |
Q/R | 0.1291 | likely_benign | 0.1144 | benign | -0.077 | Destabilizing | 0.014 | N | 0.389 | neutral | N | 0.442516819 | None | None | I |
Q/S | 0.1868 | likely_benign | 0.1781 | benign | -0.88 | Destabilizing | 0.004 | N | 0.255 | neutral | None | None | None | None | I |
Q/T | 0.1517 | likely_benign | 0.1437 | benign | -0.582 | Destabilizing | 0.004 | N | 0.456 | neutral | None | None | None | None | I |
Q/V | 0.1241 | likely_benign | 0.1092 | benign | -0.096 | Destabilizing | None | N | 0.381 | neutral | None | None | None | None | I |
Q/W | 0.572 | likely_pathogenic | 0.5215 | ambiguous | -0.25 | Destabilizing | 0.788 | D | 0.561 | neutral | None | None | None | None | I |
Q/Y | 0.3747 | ambiguous | 0.3475 | ambiguous | -0.043 | Destabilizing | 0.022 | N | 0.484 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.