Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29724 | 89395;89396;89397 | chr2:178553941;178553940;178553939 | chr2:179418668;179418667;179418666 |
N2AB | 28083 | 84472;84473;84474 | chr2:178553941;178553940;178553939 | chr2:179418668;179418667;179418666 |
N2A | 27156 | 81691;81692;81693 | chr2:178553941;178553940;178553939 | chr2:179418668;179418667;179418666 |
N2B | 20659 | 62200;62201;62202 | chr2:178553941;178553940;178553939 | chr2:179418668;179418667;179418666 |
Novex-1 | 20784 | 62575;62576;62577 | chr2:178553941;178553940;178553939 | chr2:179418668;179418667;179418666 |
Novex-2 | 20851 | 62776;62777;62778 | chr2:178553941;178553940;178553939 | chr2:179418668;179418667;179418666 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.198 | 0.051 | 0.124217242631 | gnomAD-4.0.0 | 1.61543E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88017E-06 | 0 | 0 |
E/K | rs370918981 | -0.087 | 0.058 | N | 0.529 | 0.131 | None | gnomAD-2.1.1 | 1.47E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.38E-05 | 1.43885E-04 |
E/K | rs370918981 | -0.087 | 0.058 | N | 0.529 | 0.131 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78011E-04 |
E/K | rs370918981 | -0.087 | 0.058 | N | 0.529 | 0.131 | None | gnomAD-4.0.0 | 1.68287E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.12378E-05 | 0 | 3.2175E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0931 | likely_benign | 0.0978 | benign | -0.637 | Destabilizing | 0.025 | N | 0.518 | neutral | N | 0.465836396 | None | None | N |
E/C | 0.5992 | likely_pathogenic | 0.5703 | pathogenic | -0.538 | Destabilizing | 0.869 | D | 0.497 | neutral | None | None | None | None | N |
E/D | 0.0621 | likely_benign | 0.0606 | benign | -0.55 | Destabilizing | None | N | 0.198 | neutral | N | 0.431955895 | None | None | N |
E/F | 0.5584 | ambiguous | 0.5414 | ambiguous | -0.039 | Destabilizing | 0.366 | N | 0.593 | neutral | None | None | None | None | N |
E/G | 0.1188 | likely_benign | 0.1211 | benign | -0.893 | Destabilizing | 0.025 | N | 0.523 | neutral | N | 0.479632412 | None | None | N |
E/H | 0.3142 | likely_benign | 0.297 | benign | 0.401 | Stabilizing | 0.366 | N | 0.627 | neutral | None | None | None | None | N |
E/I | 0.189 | likely_benign | 0.1965 | benign | 0.038 | Stabilizing | 0.001 | N | 0.363 | neutral | None | None | None | None | N |
E/K | 0.1326 | likely_benign | 0.143 | benign | 0.01 | Stabilizing | 0.058 | N | 0.529 | neutral | N | 0.48511559 | None | None | N |
E/L | 0.2263 | likely_benign | 0.2303 | benign | 0.038 | Stabilizing | 0.039 | N | 0.506 | neutral | None | None | None | None | N |
E/M | 0.3213 | likely_benign | 0.3285 | benign | 0.018 | Stabilizing | 0.366 | N | 0.543 | neutral | None | None | None | None | N |
E/N | 0.1163 | likely_benign | 0.1218 | benign | -0.668 | Destabilizing | 0.039 | N | 0.557 | neutral | None | None | None | None | N |
E/P | 0.2128 | likely_benign | 0.2346 | benign | -0.168 | Destabilizing | 0.141 | N | 0.647 | neutral | None | None | None | None | N |
E/Q | 0.1288 | likely_benign | 0.1306 | benign | -0.56 | Destabilizing | 0.058 | N | 0.576 | neutral | N | 0.488809256 | None | None | N |
E/R | 0.2185 | likely_benign | 0.2199 | benign | 0.486 | Stabilizing | 0.221 | N | 0.581 | neutral | None | None | None | None | N |
E/S | 0.1109 | likely_benign | 0.1135 | benign | -0.834 | Destabilizing | 0.016 | N | 0.602 | neutral | None | None | None | None | N |
E/T | 0.1399 | likely_benign | 0.1511 | benign | -0.599 | Destabilizing | 0.075 | N | 0.591 | neutral | None | None | None | None | N |
E/V | 0.1191 | likely_benign | 0.1232 | benign | -0.168 | Destabilizing | 0.012 | N | 0.473 | neutral | N | 0.451848378 | None | None | N |
E/W | 0.803 | likely_pathogenic | 0.7838 | pathogenic | 0.28 | Stabilizing | 0.869 | D | 0.541 | neutral | None | None | None | None | N |
E/Y | 0.3652 | ambiguous | 0.3554 | ambiguous | 0.242 | Stabilizing | 0.637 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.