Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29725 | 89398;89399;89400 | chr2:178553938;178553937;178553936 | chr2:179418665;179418664;179418663 |
N2AB | 28084 | 84475;84476;84477 | chr2:178553938;178553937;178553936 | chr2:179418665;179418664;179418663 |
N2A | 27157 | 81694;81695;81696 | chr2:178553938;178553937;178553936 | chr2:179418665;179418664;179418663 |
N2B | 20660 | 62203;62204;62205 | chr2:178553938;178553937;178553936 | chr2:179418665;179418664;179418663 |
Novex-1 | 20785 | 62578;62579;62580 | chr2:178553938;178553937;178553936 | chr2:179418665;179418664;179418663 |
Novex-2 | 20852 | 62779;62780;62781 | chr2:178553938;178553937;178553936 | chr2:179418665;179418664;179418663 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1284407579 | -3.342 | 0.791 | N | 0.635 | 0.205 | 0.69386598177 | gnomAD-2.1.1 | 4.16E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.43E-05 | None | 0 | 0 | 0 |
F/S | rs1284407579 | -3.342 | 0.791 | N | 0.635 | 0.205 | 0.69386598177 | gnomAD-4.0.0 | 1.6182E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45964E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.554 | ambiguous | 0.5586 | ambiguous | -2.082 | Highly Destabilizing | 0.712 | D | 0.645 | neutral | None | None | None | None | N |
F/C | 0.319 | likely_benign | 0.2667 | benign | -0.882 | Destabilizing | 0.993 | D | 0.624 | neutral | N | 0.458739852 | None | None | N |
F/D | 0.7299 | likely_pathogenic | 0.7454 | pathogenic | -0.335 | Destabilizing | 0.982 | D | 0.741 | deleterious | None | None | None | None | N |
F/E | 0.8221 | likely_pathogenic | 0.8356 | pathogenic | -0.277 | Destabilizing | 0.946 | D | 0.724 | deleterious | None | None | None | None | N |
F/G | 0.7342 | likely_pathogenic | 0.7174 | pathogenic | -2.383 | Highly Destabilizing | 0.834 | D | 0.701 | prob.delet. | None | None | None | None | N |
F/H | 0.5434 | ambiguous | 0.5506 | ambiguous | -0.62 | Destabilizing | 0.897 | D | 0.658 | prob.neutral | None | None | None | None | N |
F/I | 0.3277 | likely_benign | 0.2955 | benign | -1.198 | Destabilizing | 0.483 | N | 0.654 | prob.neutral | N | 0.456659552 | None | None | N |
F/K | 0.8637 | likely_pathogenic | 0.8801 | pathogenic | -0.778 | Destabilizing | 0.946 | D | 0.723 | deleterious | None | None | None | None | N |
F/L | 0.7939 | likely_pathogenic | 0.7986 | pathogenic | -1.198 | Destabilizing | 0.002 | N | 0.187 | neutral | N | 0.436457638 | None | None | N |
F/M | 0.547 | ambiguous | 0.5383 | ambiguous | -0.87 | Destabilizing | 0.897 | D | 0.648 | neutral | None | None | None | None | N |
F/N | 0.4539 | ambiguous | 0.4858 | ambiguous | -0.687 | Destabilizing | 0.982 | D | 0.724 | deleterious | None | None | None | None | N |
F/P | 0.7563 | likely_pathogenic | 0.772 | pathogenic | -1.483 | Destabilizing | 0.982 | D | 0.721 | deleterious | None | None | None | None | N |
F/Q | 0.8007 | likely_pathogenic | 0.8028 | pathogenic | -0.828 | Destabilizing | 0.982 | D | 0.731 | deleterious | None | None | None | None | N |
F/R | 0.7986 | likely_pathogenic | 0.8049 | pathogenic | -0.108 | Destabilizing | 0.946 | D | 0.731 | deleterious | None | None | None | None | N |
F/S | 0.4486 | ambiguous | 0.4387 | ambiguous | -1.561 | Destabilizing | 0.791 | D | 0.635 | neutral | N | 0.429225021 | None | None | N |
F/T | 0.5584 | ambiguous | 0.5531 | ambiguous | -1.415 | Destabilizing | 0.834 | D | 0.64 | neutral | None | None | None | None | N |
F/V | 0.3407 | ambiguous | 0.3028 | benign | -1.483 | Destabilizing | 0.278 | N | 0.647 | neutral | N | 0.45213638 | None | None | N |
F/W | 0.3804 | ambiguous | 0.3877 | ambiguous | -0.408 | Destabilizing | 0.946 | D | 0.582 | neutral | None | None | None | None | N |
F/Y | 0.0806 | likely_benign | 0.0796 | benign | -0.558 | Destabilizing | 0.002 | N | 0.185 | neutral | N | 0.390437347 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.