Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29734 | 89425;89426;89427 | chr2:178553805;178553804;178553803 | chr2:179418532;179418531;179418530 |
N2AB | 28093 | 84502;84503;84504 | chr2:178553805;178553804;178553803 | chr2:179418532;179418531;179418530 |
N2A | 27166 | 81721;81722;81723 | chr2:178553805;178553804;178553803 | chr2:179418532;179418531;179418530 |
N2B | 20669 | 62230;62231;62232 | chr2:178553805;178553804;178553803 | chr2:179418532;179418531;179418530 |
Novex-1 | 20794 | 62605;62606;62607 | chr2:178553805;178553804;178553803 | chr2:179418532;179418531;179418530 |
Novex-2 | 20861 | 62806;62807;62808 | chr2:178553805;178553804;178553803 | chr2:179418532;179418531;179418530 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs759858087 | -0.058 | 0.001 | N | 0.171 | 0.122 | 0.400033932507 | gnomAD-2.1.1 | 4.43E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.65E-06 | 0 |
P/L | rs759858087 | -0.058 | 0.001 | N | 0.171 | 0.122 | 0.400033932507 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 1.31027E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs759858087 | -0.058 | 0.001 | N | 0.171 | 0.122 | 0.400033932507 | gnomAD-4.0.0 | 1.07093E-05 | None | None | None | None | I | None | 0 | 3.48432E-05 | None | 0 | 0 | None | 0 | 0 | 1.28597E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1068 | likely_benign | 0.1098 | benign | -0.568 | Destabilizing | 0.104 | N | 0.371 | neutral | N | 0.482902004 | None | None | I |
P/C | 0.4647 | ambiguous | 0.4659 | ambiguous | -0.602 | Destabilizing | 0.984 | D | 0.317 | neutral | None | None | None | None | I |
P/D | 0.7744 | likely_pathogenic | 0.7842 | pathogenic | -0.273 | Destabilizing | 0.272 | N | 0.465 | neutral | None | None | None | None | I |
P/E | 0.3897 | ambiguous | 0.3976 | ambiguous | -0.396 | Destabilizing | 0.002 | N | 0.145 | neutral | None | None | None | None | I |
P/F | 0.6472 | likely_pathogenic | 0.6294 | pathogenic | -0.881 | Destabilizing | 0.724 | D | 0.439 | neutral | None | None | None | None | I |
P/G | 0.5966 | likely_pathogenic | 0.6009 | pathogenic | -0.691 | Destabilizing | 0.428 | N | 0.36 | neutral | None | None | None | None | I |
P/H | 0.2978 | likely_benign | 0.3015 | benign | -0.259 | Destabilizing | 0.8 | D | 0.299 | neutral | N | 0.482089526 | None | None | I |
P/I | 0.1925 | likely_benign | 0.2147 | benign | -0.398 | Destabilizing | 0.272 | N | 0.407 | neutral | None | None | None | None | I |
P/K | 0.181 | likely_benign | 0.1893 | benign | -0.287 | Destabilizing | 0.001 | N | 0.09 | neutral | None | None | None | None | I |
P/L | 0.1317 | likely_benign | 0.1249 | benign | -0.398 | Destabilizing | 0.001 | N | 0.171 | neutral | N | 0.47268501 | None | None | I |
P/M | 0.293 | likely_benign | 0.3043 | benign | -0.264 | Destabilizing | 0.724 | D | 0.337 | neutral | None | None | None | None | I |
P/N | 0.5737 | likely_pathogenic | 0.5883 | pathogenic | -0.038 | Destabilizing | 0.724 | D | 0.421 | neutral | None | None | None | None | I |
P/Q | 0.1934 | likely_benign | 0.2044 | benign | -0.345 | Destabilizing | 0.568 | D | 0.531 | neutral | None | None | None | None | I |
P/R | 0.1493 | likely_benign | 0.1568 | benign | 0.24 | Stabilizing | 0.22 | N | 0.42 | neutral | N | 0.477765543 | None | None | I |
P/S | 0.243 | likely_benign | 0.2601 | benign | -0.434 | Destabilizing | 0.22 | N | 0.527 | neutral | N | 0.50520286 | None | None | I |
P/T | 0.129 | likely_benign | 0.146 | benign | -0.46 | Destabilizing | 0.361 | N | 0.478 | neutral | N | 0.512494192 | None | None | I |
P/V | 0.1407 | likely_benign | 0.1555 | benign | -0.42 | Destabilizing | 0.272 | N | 0.401 | neutral | None | None | None | None | I |
P/W | 0.8379 | likely_pathogenic | 0.8221 | pathogenic | -0.913 | Destabilizing | 0.984 | D | 0.458 | neutral | None | None | None | None | I |
P/Y | 0.6053 | likely_pathogenic | 0.6003 | pathogenic | -0.591 | Destabilizing | 0.942 | D | 0.427 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.