Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29737 | 89434;89435;89436 | chr2:178553796;178553795;178553794 | chr2:179418523;179418522;179418521 |
N2AB | 28096 | 84511;84512;84513 | chr2:178553796;178553795;178553794 | chr2:179418523;179418522;179418521 |
N2A | 27169 | 81730;81731;81732 | chr2:178553796;178553795;178553794 | chr2:179418523;179418522;179418521 |
N2B | 20672 | 62239;62240;62241 | chr2:178553796;178553795;178553794 | chr2:179418523;179418522;179418521 |
Novex-1 | 20797 | 62614;62615;62616 | chr2:178553796;178553795;178553794 | chr2:179418523;179418522;179418521 |
Novex-2 | 20864 | 62815;62816;62817 | chr2:178553796;178553795;178553794 | chr2:179418523;179418522;179418521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.003 | N | 0.401 | 0.253 | 0.33835085245 | gnomAD-4.0.0 | 1.64725E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.51446E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1167 | likely_benign | 0.1032 | benign | -1.573 | Destabilizing | 0.042 | N | 0.509 | neutral | N | 0.476360033 | None | None | N |
P/C | 0.5417 | ambiguous | 0.5013 | ambiguous | -0.978 | Destabilizing | 0.958 | D | 0.783 | deleterious | None | None | None | None | N |
P/D | 0.7729 | likely_pathogenic | 0.7354 | pathogenic | -1.644 | Destabilizing | 0.055 | N | 0.584 | neutral | None | None | None | None | N |
P/E | 0.4081 | ambiguous | 0.3835 | ambiguous | -1.669 | Destabilizing | 0.002 | N | 0.373 | neutral | None | None | None | None | N |
P/F | 0.6459 | likely_pathogenic | 0.5875 | pathogenic | -1.299 | Destabilizing | 0.667 | D | 0.792 | deleterious | None | None | None | None | N |
P/G | 0.5149 | ambiguous | 0.4842 | ambiguous | -1.868 | Destabilizing | 0.124 | N | 0.673 | neutral | None | None | None | None | N |
P/H | 0.335 | likely_benign | 0.307 | benign | -1.394 | Destabilizing | 0.497 | N | 0.776 | deleterious | None | None | None | None | N |
P/I | 0.4191 | ambiguous | 0.3587 | ambiguous | -0.863 | Destabilizing | 0.497 | N | 0.769 | deleterious | None | None | None | None | N |
P/K | 0.3094 | likely_benign | 0.3098 | benign | -1.28 | Destabilizing | 0.055 | N | 0.585 | neutral | None | None | None | None | N |
P/L | 0.2133 | likely_benign | 0.1849 | benign | -0.863 | Destabilizing | 0.096 | N | 0.724 | prob.delet. | N | 0.495174713 | None | None | N |
P/M | 0.3895 | ambiguous | 0.3409 | ambiguous | -0.589 | Destabilizing | 0.667 | D | 0.777 | deleterious | None | None | None | None | N |
P/N | 0.5746 | likely_pathogenic | 0.5241 | ambiguous | -1.012 | Destabilizing | 0.22 | N | 0.693 | prob.neutral | None | None | None | None | N |
P/Q | 0.194 | likely_benign | 0.1867 | benign | -1.254 | Destabilizing | 0.001 | N | 0.393 | neutral | N | 0.51028618 | None | None | N |
P/R | 0.2444 | likely_benign | 0.2381 | benign | -0.689 | Destabilizing | 0.096 | N | 0.718 | prob.delet. | N | 0.484690554 | None | None | N |
P/S | 0.2261 | likely_benign | 0.2094 | benign | -1.478 | Destabilizing | 0.003 | N | 0.403 | neutral | N | 0.510112822 | None | None | N |
P/T | 0.2294 | likely_benign | 0.1927 | benign | -1.408 | Destabilizing | 0.003 | N | 0.401 | neutral | N | 0.49927609 | None | None | N |
P/V | 0.3004 | likely_benign | 0.2623 | benign | -1.066 | Destabilizing | 0.124 | N | 0.701 | prob.neutral | None | None | None | None | N |
P/W | 0.8305 | likely_pathogenic | 0.8015 | pathogenic | -1.458 | Destabilizing | 0.958 | D | 0.781 | deleterious | None | None | None | None | N |
P/Y | 0.6151 | likely_pathogenic | 0.5684 | pathogenic | -1.202 | Destabilizing | 0.667 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.