Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29742 | 89449;89450;89451 | chr2:178553781;178553780;178553779 | chr2:179418508;179418507;179418506 |
N2AB | 28101 | 84526;84527;84528 | chr2:178553781;178553780;178553779 | chr2:179418508;179418507;179418506 |
N2A | 27174 | 81745;81746;81747 | chr2:178553781;178553780;178553779 | chr2:179418508;179418507;179418506 |
N2B | 20677 | 62254;62255;62256 | chr2:178553781;178553780;178553779 | chr2:179418508;179418507;179418506 |
Novex-1 | 20802 | 62629;62630;62631 | chr2:178553781;178553780;178553779 | chr2:179418508;179418507;179418506 |
Novex-2 | 20869 | 62830;62831;62832 | chr2:178553781;178553780;178553779 | chr2:179418508;179418507;179418506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.549 | N | 0.535 | 0.166 | 0.463586170655 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4788 | ambiguous | 0.4197 | ambiguous | -0.739 | Destabilizing | 0.25 | N | 0.477 | neutral | None | None | None | None | N |
R/C | 0.203 | likely_benign | 0.1721 | benign | -0.877 | Destabilizing | 0.992 | D | 0.567 | neutral | None | None | None | None | N |
R/D | 0.7339 | likely_pathogenic | 0.6883 | pathogenic | 0.087 | Stabilizing | 0.617 | D | 0.564 | neutral | None | None | None | None | N |
R/E | 0.461 | ambiguous | 0.409 | ambiguous | 0.224 | Stabilizing | 0.25 | N | 0.519 | neutral | None | None | None | None | N |
R/F | 0.5121 | ambiguous | 0.4889 | ambiguous | -0.572 | Destabilizing | 0.972 | D | 0.572 | neutral | None | None | None | None | N |
R/G | 0.3653 | ambiguous | 0.3034 | benign | -1.036 | Destabilizing | 0.549 | D | 0.535 | neutral | N | 0.517481511 | None | None | N |
R/H | 0.0974 | likely_benign | 0.0943 | benign | -1.203 | Destabilizing | 0.92 | D | 0.555 | neutral | None | None | None | None | N |
R/I | 0.2719 | likely_benign | 0.2369 | benign | 0.057 | Stabilizing | 0.896 | D | 0.584 | neutral | N | 0.491084344 | None | None | N |
R/K | 0.1123 | likely_benign | 0.1041 | benign | -0.627 | Destabilizing | 0.002 | N | 0.169 | neutral | N | 0.425723356 | None | None | N |
R/L | 0.301 | likely_benign | 0.2682 | benign | 0.057 | Stabilizing | 0.617 | D | 0.55 | neutral | None | None | None | None | N |
R/M | 0.3066 | likely_benign | 0.2659 | benign | -0.436 | Destabilizing | 0.972 | D | 0.567 | neutral | None | None | None | None | N |
R/N | 0.5673 | likely_pathogenic | 0.5218 | ambiguous | -0.329 | Destabilizing | 0.617 | D | 0.492 | neutral | None | None | None | None | N |
R/P | 0.9245 | likely_pathogenic | 0.8878 | pathogenic | -0.187 | Destabilizing | 0.92 | D | 0.573 | neutral | None | None | None | None | N |
R/Q | 0.1159 | likely_benign | 0.1059 | benign | -0.426 | Destabilizing | 0.447 | N | 0.535 | neutral | None | None | None | None | N |
R/S | 0.4934 | ambiguous | 0.4316 | ambiguous | -1.098 | Destabilizing | 0.045 | N | 0.321 | neutral | N | 0.450792372 | None | None | N |
R/T | 0.2448 | likely_benign | 0.2134 | benign | -0.773 | Destabilizing | 0.379 | N | 0.508 | neutral | N | 0.441172811 | None | None | N |
R/V | 0.3405 | ambiguous | 0.3057 | benign | -0.187 | Destabilizing | 0.617 | D | 0.581 | neutral | None | None | None | None | N |
R/W | 0.215 | likely_benign | 0.1902 | benign | -0.264 | Destabilizing | 0.992 | D | 0.645 | neutral | None | None | None | None | N |
R/Y | 0.3982 | ambiguous | 0.3678 | ambiguous | 0.03 | Stabilizing | 0.972 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.