Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29751 | 89476;89477;89478 | chr2:178553754;178553753;178553752 | chr2:179418481;179418480;179418479 |
N2AB | 28110 | 84553;84554;84555 | chr2:178553754;178553753;178553752 | chr2:179418481;179418480;179418479 |
N2A | 27183 | 81772;81773;81774 | chr2:178553754;178553753;178553752 | chr2:179418481;179418480;179418479 |
N2B | 20686 | 62281;62282;62283 | chr2:178553754;178553753;178553752 | chr2:179418481;179418480;179418479 |
Novex-1 | 20811 | 62656;62657;62658 | chr2:178553754;178553753;178553752 | chr2:179418481;179418480;179418479 |
Novex-2 | 20878 | 62857;62858;62859 | chr2:178553754;178553753;178553752 | chr2:179418481;179418480;179418479 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1367538790 | -1.648 | 0.991 | N | 0.744 | 0.37 | 0.462022758384 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
I/F | rs1367538790 | -1.648 | 0.991 | N | 0.744 | 0.37 | 0.462022758384 | gnomAD-4.0.0 | 1.59996E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87565E-06 | 0 | 0 |
I/T | rs397517742 | None | 0.939 | N | 0.769 | 0.51 | 0.688008359126 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs397517742 | None | 0.939 | N | 0.769 | 0.51 | 0.688008359126 | gnomAD-4.0.0 | 2.57309E-06 | None | None | None | None | N | None | 0 | 3.40136E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1367538790 | -1.235 | 0.02 | N | 0.209 | 0.079 | None | gnomAD-2.1.1 | 7.22E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.58E-05 | 0 |
I/V | rs1367538790 | -1.235 | 0.02 | N | 0.209 | 0.079 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/V | rs1367538790 | -1.235 | 0.02 | N | 0.209 | 0.079 | None | gnomAD-4.0.0 | 6.4333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20259E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8132 | likely_pathogenic | 0.7988 | pathogenic | -2.82 | Highly Destabilizing | 0.91 | D | 0.69 | prob.neutral | None | None | None | None | N |
I/C | 0.908 | likely_pathogenic | 0.913 | pathogenic | -2.711 | Highly Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
I/D | 0.9979 | likely_pathogenic | 0.9972 | pathogenic | -3.006 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
I/E | 0.9927 | likely_pathogenic | 0.9917 | pathogenic | -2.71 | Highly Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
I/F | 0.6429 | likely_pathogenic | 0.6152 | pathogenic | -1.821 | Destabilizing | 0.991 | D | 0.744 | deleterious | N | 0.481425325 | None | None | N |
I/G | 0.9864 | likely_pathogenic | 0.9839 | pathogenic | -3.414 | Highly Destabilizing | 0.993 | D | 0.844 | deleterious | None | None | None | None | N |
I/H | 0.9896 | likely_pathogenic | 0.9867 | pathogenic | -2.977 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
I/K | 0.9848 | likely_pathogenic | 0.9819 | pathogenic | -2.082 | Highly Destabilizing | 0.993 | D | 0.844 | deleterious | None | None | None | None | N |
I/L | 0.257 | likely_benign | 0.2729 | benign | -1.052 | Destabilizing | 0.58 | D | 0.351 | neutral | N | 0.489502689 | None | None | N |
I/M | 0.2415 | likely_benign | 0.2585 | benign | -1.488 | Destabilizing | 0.991 | D | 0.706 | prob.neutral | N | 0.520657889 | None | None | N |
I/N | 0.9654 | likely_pathogenic | 0.9563 | pathogenic | -2.641 | Highly Destabilizing | 0.997 | D | 0.846 | deleterious | D | 0.523256148 | None | None | N |
I/P | 0.9984 | likely_pathogenic | 0.9975 | pathogenic | -1.63 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9828 | likely_pathogenic | 0.9814 | pathogenic | -2.359 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
I/R | 0.9744 | likely_pathogenic | 0.9698 | pathogenic | -2.052 | Highly Destabilizing | 0.993 | D | 0.851 | deleterious | None | None | None | None | N |
I/S | 0.9352 | likely_pathogenic | 0.9193 | pathogenic | -3.392 | Highly Destabilizing | 0.991 | D | 0.824 | deleterious | N | 0.493542099 | None | None | N |
I/T | 0.9081 | likely_pathogenic | 0.8824 | pathogenic | -2.922 | Highly Destabilizing | 0.939 | D | 0.769 | deleterious | N | 0.504809499 | None | None | N |
I/V | 0.0826 | likely_benign | 0.0808 | benign | -1.63 | Destabilizing | 0.02 | N | 0.209 | neutral | N | 0.455656687 | None | None | N |
I/W | 0.9929 | likely_pathogenic | 0.9918 | pathogenic | -2.064 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
I/Y | 0.9589 | likely_pathogenic | 0.9517 | pathogenic | -1.872 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.