Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29756 | 89491;89492;89493 | chr2:178553739;178553738;178553737 | chr2:179418466;179418465;179418464 |
N2AB | 28115 | 84568;84569;84570 | chr2:178553739;178553738;178553737 | chr2:179418466;179418465;179418464 |
N2A | 27188 | 81787;81788;81789 | chr2:178553739;178553738;178553737 | chr2:179418466;179418465;179418464 |
N2B | 20691 | 62296;62297;62298 | chr2:178553739;178553738;178553737 | chr2:179418466;179418465;179418464 |
Novex-1 | 20816 | 62671;62672;62673 | chr2:178553739;178553738;178553737 | chr2:179418466;179418465;179418464 |
Novex-2 | 20883 | 62872;62873;62874 | chr2:178553739;178553738;178553737 | chr2:179418466;179418465;179418464 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.425 | N | 0.245 | 0.104 | 0.139678290688 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/R | None | None | 0.642 | N | 0.447 | 0.157 | 0.260249123532 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86007E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0992 | likely_benign | 0.0931 | benign | -0.592 | Destabilizing | 0.176 | N | 0.195 | neutral | None | None | None | None | I |
S/C | 0.1211 | likely_benign | 0.1183 | benign | -0.44 | Destabilizing | 0.975 | D | 0.441 | neutral | N | 0.507093946 | None | None | I |
S/D | 0.4852 | ambiguous | 0.5025 | ambiguous | -0.611 | Destabilizing | 0.003 | N | 0.091 | neutral | None | None | None | None | I |
S/E | 0.5367 | ambiguous | 0.5472 | ambiguous | -0.534 | Destabilizing | 0.004 | N | 0.067 | neutral | None | None | None | None | I |
S/F | 0.303 | likely_benign | 0.2831 | benign | -0.551 | Destabilizing | 0.704 | D | 0.59 | neutral | None | None | None | None | I |
S/G | 0.0775 | likely_benign | 0.0787 | benign | -0.927 | Destabilizing | 0.425 | N | 0.245 | neutral | N | 0.490951058 | None | None | I |
S/H | 0.4117 | ambiguous | 0.4236 | ambiguous | -1.428 | Destabilizing | 0.981 | D | 0.444 | neutral | None | None | None | None | I |
S/I | 0.1814 | likely_benign | 0.1689 | benign | 0.212 | Stabilizing | 0.002 | N | 0.252 | neutral | N | 0.486371957 | None | None | I |
S/K | 0.704 | likely_pathogenic | 0.7174 | pathogenic | -0.707 | Destabilizing | 0.495 | N | 0.285 | neutral | None | None | None | None | I |
S/L | 0.1162 | likely_benign | 0.1085 | benign | 0.212 | Stabilizing | 0.003 | N | 0.238 | neutral | None | None | None | None | I |
S/M | 0.171 | likely_benign | 0.1662 | benign | 0.286 | Stabilizing | 0.893 | D | 0.447 | neutral | None | None | None | None | I |
S/N | 0.1214 | likely_benign | 0.1313 | benign | -0.921 | Destabilizing | 0.425 | N | 0.289 | neutral | N | 0.442234391 | None | None | I |
S/P | 0.7321 | likely_pathogenic | 0.7636 | pathogenic | -0.019 | Destabilizing | 0.828 | D | 0.441 | neutral | None | None | None | None | I |
S/Q | 0.4736 | ambiguous | 0.487 | ambiguous | -0.857 | Destabilizing | 0.704 | D | 0.288 | neutral | None | None | None | None | I |
S/R | 0.6776 | likely_pathogenic | 0.6796 | pathogenic | -0.808 | Destabilizing | 0.642 | D | 0.447 | neutral | N | 0.460628151 | None | None | I |
S/T | 0.0877 | likely_benign | 0.0846 | benign | -0.755 | Destabilizing | 0.01 | N | 0.096 | neutral | N | 0.440404807 | None | None | I |
S/V | 0.1837 | likely_benign | 0.1755 | benign | -0.019 | Destabilizing | 0.013 | N | 0.235 | neutral | None | None | None | None | I |
S/W | 0.4726 | ambiguous | 0.4572 | ambiguous | -0.691 | Destabilizing | 0.995 | D | 0.522 | neutral | None | None | None | None | I |
S/Y | 0.2754 | likely_benign | 0.2664 | benign | -0.35 | Destabilizing | 0.981 | D | 0.603 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.