Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29761 | 89506;89507;89508 | chr2:178553724;178553723;178553722 | chr2:179418451;179418450;179418449 |
N2AB | 28120 | 84583;84584;84585 | chr2:178553724;178553723;178553722 | chr2:179418451;179418450;179418449 |
N2A | 27193 | 81802;81803;81804 | chr2:178553724;178553723;178553722 | chr2:179418451;179418450;179418449 |
N2B | 20696 | 62311;62312;62313 | chr2:178553724;178553723;178553722 | chr2:179418451;179418450;179418449 |
Novex-1 | 20821 | 62686;62687;62688 | chr2:178553724;178553723;178553722 | chr2:179418451;179418450;179418449 |
Novex-2 | 20888 | 62887;62888;62889 | chr2:178553724;178553723;178553722 | chr2:179418451;179418450;179418449 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 1.0 | N | 0.727 | 0.563 | 0.412064437402 | gnomAD-4.0.0 | 6.84273E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99518E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8437 | likely_pathogenic | 0.8152 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.481372418 | None | None | I |
D/C | 0.9518 | likely_pathogenic | 0.9461 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
D/E | 0.8133 | likely_pathogenic | 0.7845 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.451 | neutral | N | 0.478877203 | None | None | I |
D/F | 0.9779 | likely_pathogenic | 0.9742 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
D/G | 0.8072 | likely_pathogenic | 0.8033 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.515645598 | None | None | I |
D/H | 0.8852 | likely_pathogenic | 0.8775 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.498755884 | None | None | I |
D/I | 0.9605 | likely_pathogenic | 0.9481 | pathogenic | 0.084 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
D/K | 0.9642 | likely_pathogenic | 0.9585 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
D/L | 0.9433 | likely_pathogenic | 0.933 | pathogenic | 0.084 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
D/M | 0.9818 | likely_pathogenic | 0.9795 | pathogenic | 0.582 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
D/N | 0.2626 | likely_benign | 0.2356 | benign | -0.675 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | N | 0.519271023 | None | None | I |
D/P | 0.9745 | likely_pathogenic | 0.9697 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
D/Q | 0.9371 | likely_pathogenic | 0.9328 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
D/R | 0.9512 | likely_pathogenic | 0.947 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
D/S | 0.5015 | ambiguous | 0.4747 | ambiguous | -0.891 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
D/T | 0.7907 | likely_pathogenic | 0.7952 | pathogenic | -0.641 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
D/V | 0.903 | likely_pathogenic | 0.8842 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.49166554 | None | None | I |
D/W | 0.9941 | likely_pathogenic | 0.9931 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/Y | 0.8415 | likely_pathogenic | 0.828 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | D | 0.533749853 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.