Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29772 | 89539;89540;89541 | chr2:178553691;178553690;178553689 | chr2:179418418;179418417;179418416 |
N2AB | 28131 | 84616;84617;84618 | chr2:178553691;178553690;178553689 | chr2:179418418;179418417;179418416 |
N2A | 27204 | 81835;81836;81837 | chr2:178553691;178553690;178553689 | chr2:179418418;179418417;179418416 |
N2B | 20707 | 62344;62345;62346 | chr2:178553691;178553690;178553689 | chr2:179418418;179418417;179418416 |
Novex-1 | 20832 | 62719;62720;62721 | chr2:178553691;178553690;178553689 | chr2:179418418;179418417;179418416 |
Novex-2 | 20899 | 62920;62921;62922 | chr2:178553691;178553690;178553689 | chr2:179418418;179418417;179418416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | -1.494 | 0.271 | N | 0.649 | 0.265 | None | gnomAD-2.1.1 | 2.394E-04 | None | None | None | None | N | None | 4.13223E-04 | 2.82933E-04 | None | 9.68E-05 | 0 | None | 3.27E-05 | None | 0 | 3.36432E-04 | 2.81294E-04 |
E/K | None | -1.494 | 0.271 | N | 0.649 | 0.265 | None | gnomAD-3.1.2 | 2.82631E-04 | None | None | None | None | N | None | 4.58494E-04 | 1.31113E-04 | 0 | 0 | 0 | None | 0 | 0 | 3.08715E-04 | 2.06954E-04 | 0 |
E/K | None | -1.494 | 0.271 | N | 0.649 | 0.265 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | None | -1.494 | 0.271 | N | 0.649 | 0.265 | None | gnomAD-4.0.0 | 2.80701E-04 | None | None | None | None | N | None | 4.26451E-04 | 2.66684E-04 | None | 3.37792E-05 | 0 | None | 0 | 1.65017E-04 | 3.29715E-04 | 3.29366E-05 | 1.76068E-04 |
E/Q | rs200503016 | None | 0.01 | N | 0.439 | 0.148 | 0.178374595973 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs200503016 | None | 0.01 | N | 0.439 | 0.148 | 0.178374595973 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 2.41313E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2329 | likely_benign | 0.2393 | benign | -2.525 | Highly Destabilizing | None | N | 0.453 | neutral | N | 0.51527675 | None | None | N |
E/C | 0.8673 | likely_pathogenic | 0.8795 | pathogenic | -1.338 | Destabilizing | 0.824 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/D | 0.3484 | ambiguous | 0.3214 | benign | -1.798 | Destabilizing | None | N | 0.464 | neutral | N | 0.492065779 | None | None | N |
E/F | 0.8969 | likely_pathogenic | 0.895 | pathogenic | -2.282 | Highly Destabilizing | 0.555 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/G | 0.3455 | ambiguous | 0.3679 | ambiguous | -2.869 | Highly Destabilizing | None | N | 0.513 | neutral | N | 0.517051177 | None | None | N |
E/H | 0.6577 | likely_pathogenic | 0.6573 | pathogenic | -1.879 | Destabilizing | 0.38 | N | 0.631 | neutral | None | None | None | None | N |
E/I | 0.7736 | likely_pathogenic | 0.7621 | pathogenic | -1.516 | Destabilizing | 0.38 | N | 0.693 | prob.neutral | None | None | None | None | N |
E/K | 0.4954 | ambiguous | 0.4853 | ambiguous | -1.989 | Destabilizing | 0.271 | N | 0.649 | neutral | N | 0.491132108 | None | None | N |
E/L | 0.7675 | likely_pathogenic | 0.7581 | pathogenic | -1.516 | Destabilizing | 0.235 | N | 0.674 | neutral | None | None | None | None | N |
E/M | 0.6376 | likely_pathogenic | 0.6476 | pathogenic | -0.683 | Destabilizing | 0.824 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/N | 0.5648 | likely_pathogenic | 0.5464 | ambiguous | -2.025 | Highly Destabilizing | 0.149 | N | 0.626 | neutral | None | None | None | None | N |
E/P | 0.9976 | likely_pathogenic | 0.9964 | pathogenic | -1.844 | Destabilizing | 0.38 | N | 0.635 | neutral | None | None | None | None | N |
E/Q | 0.1539 | likely_benign | 0.1499 | benign | -1.832 | Destabilizing | 0.01 | N | 0.439 | neutral | N | 0.476672252 | None | None | N |
E/R | 0.6186 | likely_pathogenic | 0.6102 | pathogenic | -1.658 | Destabilizing | 0.235 | N | 0.642 | neutral | None | None | None | None | N |
E/S | 0.2845 | likely_benign | 0.2966 | benign | -2.797 | Highly Destabilizing | 0.081 | N | 0.611 | neutral | None | None | None | None | N |
E/T | 0.4919 | ambiguous | 0.4984 | ambiguous | -2.455 | Highly Destabilizing | 0.081 | N | 0.597 | neutral | None | None | None | None | N |
E/V | 0.5739 | likely_pathogenic | 0.5605 | ambiguous | -1.844 | Destabilizing | 0.062 | N | 0.66 | neutral | N | 0.504680913 | None | None | N |
E/W | 0.9653 | likely_pathogenic | 0.9597 | pathogenic | -2.194 | Highly Destabilizing | 0.935 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/Y | 0.8704 | likely_pathogenic | 0.8575 | pathogenic | -2.049 | Highly Destabilizing | 0.555 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.