Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29779 | 89560;89561;89562 | chr2:178553670;178553669;178553668 | chr2:179418397;179418396;179418395 |
N2AB | 28138 | 84637;84638;84639 | chr2:178553670;178553669;178553668 | chr2:179418397;179418396;179418395 |
N2A | 27211 | 81856;81857;81858 | chr2:178553670;178553669;178553668 | chr2:179418397;179418396;179418395 |
N2B | 20714 | 62365;62366;62367 | chr2:178553670;178553669;178553668 | chr2:179418397;179418396;179418395 |
Novex-1 | 20839 | 62740;62741;62742 | chr2:178553670;178553669;178553668 | chr2:179418397;179418396;179418395 |
Novex-2 | 20906 | 62941;62942;62943 | chr2:178553670;178553669;178553668 | chr2:179418397;179418396;179418395 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.001 | N | 0.227 | 0.073 | 0.222439326576 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0949 | likely_benign | 0.0904 | benign | 0.022 | Stabilizing | 0.024 | N | 0.48 | neutral | N | 0.497087596 | None | None | N |
E/C | 0.6502 | likely_pathogenic | 0.6469 | pathogenic | -0.236 | Destabilizing | 0.864 | D | 0.422 | neutral | None | None | None | None | N |
E/D | 0.0855 | likely_benign | 0.0844 | benign | -0.244 | Destabilizing | None | N | 0.207 | neutral | N | 0.458281279 | None | None | N |
E/F | 0.5452 | ambiguous | 0.5405 | ambiguous | -0.073 | Destabilizing | 0.628 | D | 0.433 | neutral | None | None | None | None | N |
E/G | 0.0809 | likely_benign | 0.0793 | benign | -0.077 | Destabilizing | 0.055 | N | 0.425 | neutral | N | 0.435689634 | None | None | N |
E/H | 0.3192 | likely_benign | 0.3109 | benign | 0.575 | Stabilizing | 0.356 | N | 0.455 | neutral | None | None | None | None | N |
E/I | 0.2109 | likely_benign | 0.1998 | benign | 0.222 | Stabilizing | 0.214 | N | 0.445 | neutral | None | None | None | None | N |
E/K | 0.091 | likely_benign | 0.0851 | benign | 0.351 | Stabilizing | 0.001 | N | 0.227 | neutral | N | 0.467919482 | None | None | N |
E/L | 0.2133 | likely_benign | 0.2027 | benign | 0.222 | Stabilizing | 0.072 | N | 0.431 | neutral | None | None | None | None | N |
E/M | 0.2573 | likely_benign | 0.2403 | benign | -0.056 | Destabilizing | 0.356 | N | 0.447 | neutral | None | None | None | None | N |
E/N | 0.1316 | likely_benign | 0.1256 | benign | 0.231 | Stabilizing | 0.038 | N | 0.415 | neutral | None | None | None | None | N |
E/P | 0.2528 | likely_benign | 0.2584 | benign | 0.172 | Stabilizing | 0.136 | N | 0.487 | neutral | None | None | None | None | N |
E/Q | 0.1186 | likely_benign | 0.114 | benign | 0.217 | Stabilizing | 0.001 | N | 0.204 | neutral | N | 0.473594661 | None | None | N |
E/R | 0.173 | likely_benign | 0.1681 | benign | 0.596 | Stabilizing | None | N | 0.316 | neutral | None | None | None | None | N |
E/S | 0.1159 | likely_benign | 0.1137 | benign | 0.046 | Stabilizing | 0.016 | N | 0.404 | neutral | None | None | None | None | N |
E/T | 0.1071 | likely_benign | 0.1054 | benign | 0.131 | Stabilizing | 0.001 | N | 0.361 | neutral | None | None | None | None | N |
E/V | 0.1348 | likely_benign | 0.1256 | benign | 0.172 | Stabilizing | 0.055 | N | 0.446 | neutral | N | 0.484601089 | None | None | N |
E/W | 0.7294 | likely_pathogenic | 0.7172 | pathogenic | -0.051 | Destabilizing | 0.864 | D | 0.427 | neutral | None | None | None | None | N |
E/Y | 0.4193 | ambiguous | 0.4126 | ambiguous | 0.146 | Stabilizing | 0.628 | D | 0.443 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.