Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29782 | 89569;89570;89571 | chr2:178553661;178553660;178553659 | chr2:179418388;179418387;179418386 |
N2AB | 28141 | 84646;84647;84648 | chr2:178553661;178553660;178553659 | chr2:179418388;179418387;179418386 |
N2A | 27214 | 81865;81866;81867 | chr2:178553661;178553660;178553659 | chr2:179418388;179418387;179418386 |
N2B | 20717 | 62374;62375;62376 | chr2:178553661;178553660;178553659 | chr2:179418388;179418387;179418386 |
Novex-1 | 20842 | 62749;62750;62751 | chr2:178553661;178553660;178553659 | chr2:179418388;179418387;179418386 |
Novex-2 | 20909 | 62950;62951;62952 | chr2:178553661;178553660;178553659 | chr2:179418388;179418387;179418386 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1400626224 | None | 0.001 | N | 0.176 | 0.101 | 0.209622950755 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1400626224 | None | 0.001 | N | 0.176 | 0.101 | 0.209622950755 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
T/S | None | None | 0.09 | N | 0.301 | 0.077 | 0.104622674875 | gnomAD-4.0.0 | 1.59114E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.076 | likely_benign | 0.0727 | benign | -0.643 | Destabilizing | 0.001 | N | 0.071 | neutral | N | 0.484424943 | None | None | N |
T/C | 0.2718 | likely_benign | 0.2597 | benign | -0.452 | Destabilizing | 0.944 | D | 0.333 | neutral | None | None | None | None | N |
T/D | 0.2629 | likely_benign | 0.2331 | benign | 0.242 | Stabilizing | 0.563 | D | 0.356 | neutral | None | None | None | None | N |
T/E | 0.1519 | likely_benign | 0.1436 | benign | 0.219 | Stabilizing | 0.388 | N | 0.29 | neutral | None | None | None | None | N |
T/F | 0.168 | likely_benign | 0.1616 | benign | -0.823 | Destabilizing | 0.69 | D | 0.386 | neutral | None | None | None | None | N |
T/G | 0.1863 | likely_benign | 0.1829 | benign | -0.86 | Destabilizing | 0.241 | N | 0.285 | neutral | None | None | None | None | N |
T/H | 0.1535 | likely_benign | 0.1519 | benign | -1.04 | Destabilizing | 0.981 | D | 0.352 | neutral | None | None | None | None | N |
T/I | 0.0968 | likely_benign | 0.0874 | benign | -0.173 | Destabilizing | 0.001 | N | 0.176 | neutral | N | 0.464204387 | None | None | N |
T/K | 0.1033 | likely_benign | 0.1025 | benign | -0.536 | Destabilizing | 0.241 | N | 0.275 | neutral | None | None | None | None | N |
T/L | 0.0759 | likely_benign | 0.0711 | benign | -0.173 | Destabilizing | 0.043 | N | 0.303 | neutral | None | None | None | None | N |
T/M | 0.0809 | likely_benign | 0.0746 | benign | -0.073 | Destabilizing | 0.69 | D | 0.337 | neutral | None | None | None | None | N |
T/N | 0.0873 | likely_benign | 0.0849 | benign | -0.421 | Destabilizing | 0.773 | D | 0.328 | neutral | N | 0.474842668 | None | None | N |
T/P | 0.3817 | ambiguous | 0.3595 | ambiguous | -0.298 | Destabilizing | 0.773 | D | 0.361 | neutral | N | 0.475661199 | None | None | N |
T/Q | 0.1287 | likely_benign | 0.1291 | benign | -0.575 | Destabilizing | 0.69 | D | 0.372 | neutral | None | None | None | None | N |
T/R | 0.1042 | likely_benign | 0.102 | benign | -0.278 | Destabilizing | 0.002 | N | 0.172 | neutral | None | None | None | None | N |
T/S | 0.0986 | likely_benign | 0.0961 | benign | -0.725 | Destabilizing | 0.09 | N | 0.301 | neutral | N | 0.470668999 | None | None | N |
T/V | 0.0826 | likely_benign | 0.078 | benign | -0.298 | Destabilizing | 0.043 | N | 0.279 | neutral | None | None | None | None | N |
T/W | 0.46 | ambiguous | 0.451 | ambiguous | -0.769 | Destabilizing | 0.981 | D | 0.417 | neutral | None | None | None | None | N |
T/Y | 0.1778 | likely_benign | 0.1795 | benign | -0.526 | Destabilizing | 0.818 | D | 0.371 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.