Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29785 | 89578;89579;89580 | chr2:178553652;178553651;178553650 | chr2:179418379;179418378;179418377 |
N2AB | 28144 | 84655;84656;84657 | chr2:178553652;178553651;178553650 | chr2:179418379;179418378;179418377 |
N2A | 27217 | 81874;81875;81876 | chr2:178553652;178553651;178553650 | chr2:179418379;179418378;179418377 |
N2B | 20720 | 62383;62384;62385 | chr2:178553652;178553651;178553650 | chr2:179418379;179418378;179418377 |
Novex-1 | 20845 | 62758;62759;62760 | chr2:178553652;178553651;178553650 | chr2:179418379;179418378;179418377 |
Novex-2 | 20912 | 62959;62960;62961 | chr2:178553652;178553651;178553650 | chr2:179418379;179418378;179418377 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.988 | N | 0.626 | 0.286 | 0.589873123614 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1445 | likely_benign | 0.1357 | benign | -0.809 | Destabilizing | 0.675 | D | 0.402 | neutral | N | 0.445005337 | None | None | N |
S/C | 0.155 | likely_benign | 0.1499 | benign | -0.576 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.474183623 | None | None | N |
S/D | 0.7539 | likely_pathogenic | 0.7631 | pathogenic | -0.355 | Destabilizing | 0.969 | D | 0.601 | neutral | None | None | None | None | N |
S/E | 0.851 | likely_pathogenic | 0.8794 | pathogenic | -0.295 | Destabilizing | 0.969 | D | 0.603 | neutral | None | None | None | None | N |
S/F | 0.5856 | likely_pathogenic | 0.5995 | pathogenic | -0.884 | Destabilizing | 0.988 | D | 0.626 | neutral | N | 0.472916175 | None | None | N |
S/G | 0.1589 | likely_benign | 0.1474 | benign | -1.119 | Destabilizing | 0.02 | N | 0.197 | neutral | None | None | None | None | N |
S/H | 0.652 | likely_pathogenic | 0.6617 | pathogenic | -1.59 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
S/I | 0.3944 | ambiguous | 0.4235 | ambiguous | -0.074 | Destabilizing | 0.17 | N | 0.501 | neutral | None | None | None | None | N |
S/K | 0.9394 | likely_pathogenic | 0.949 | pathogenic | -0.595 | Destabilizing | 0.939 | D | 0.613 | neutral | None | None | None | None | N |
S/L | 0.2394 | likely_benign | 0.2457 | benign | -0.074 | Destabilizing | 0.759 | D | 0.577 | neutral | None | None | None | None | N |
S/M | 0.3939 | ambiguous | 0.4136 | ambiguous | 0.073 | Stabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | N |
S/N | 0.2858 | likely_benign | 0.3046 | benign | -0.757 | Destabilizing | 0.969 | D | 0.585 | neutral | None | None | None | None | N |
S/P | 0.6585 | likely_pathogenic | 0.6614 | pathogenic | -0.283 | Destabilizing | 0.996 | D | 0.607 | neutral | N | 0.496895595 | None | None | N |
S/Q | 0.8093 | likely_pathogenic | 0.8368 | pathogenic | -0.766 | Destabilizing | 0.997 | D | 0.637 | neutral | None | None | None | None | N |
S/R | 0.9212 | likely_pathogenic | 0.9276 | pathogenic | -0.679 | Destabilizing | 0.991 | D | 0.603 | neutral | None | None | None | None | N |
S/T | 0.1002 | likely_benign | 0.1009 | benign | -0.693 | Destabilizing | 0.061 | N | 0.198 | neutral | N | 0.457681059 | None | None | N |
S/V | 0.3584 | ambiguous | 0.3765 | ambiguous | -0.283 | Destabilizing | 0.759 | D | 0.578 | neutral | None | None | None | None | N |
S/W | 0.6906 | likely_pathogenic | 0.6989 | pathogenic | -0.908 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
S/Y | 0.4817 | ambiguous | 0.5006 | ambiguous | -0.594 | Destabilizing | 0.996 | D | 0.629 | neutral | N | 0.472095938 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.