Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29787 | 89584;89585;89586 | chr2:178553646;178553645;178553644 | chr2:179418373;179418372;179418371 |
N2AB | 28146 | 84661;84662;84663 | chr2:178553646;178553645;178553644 | chr2:179418373;179418372;179418371 |
N2A | 27219 | 81880;81881;81882 | chr2:178553646;178553645;178553644 | chr2:179418373;179418372;179418371 |
N2B | 20722 | 62389;62390;62391 | chr2:178553646;178553645;178553644 | chr2:179418373;179418372;179418371 |
Novex-1 | 20847 | 62764;62765;62766 | chr2:178553646;178553645;178553644 | chr2:179418373;179418372;179418371 |
Novex-2 | 20914 | 62965;62966;62967 | chr2:178553646;178553645;178553644 | chr2:179418373;179418372;179418371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1217080477 | 0.071 | 0.027 | N | 0.283 | 0.107 | 0.186928172975 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1217080477 | 0.071 | 0.027 | N | 0.283 | 0.107 | 0.186928172975 | gnomAD-4.0.0 | 4.77345E-06 | None | None | None | None | I | None | 0 | 6.85871E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.001 | N | 0.106 | 0.095 | 0.0297737177859 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1713 | likely_benign | 0.1841 | benign | -0.151 | Destabilizing | 0.035 | N | 0.327 | neutral | None | None | None | None | I |
K/C | 0.5544 | ambiguous | 0.6061 | pathogenic | -0.664 | Destabilizing | 0.935 | D | 0.284 | neutral | None | None | None | None | I |
K/D | 0.3569 | ambiguous | 0.3894 | ambiguous | -0.487 | Destabilizing | 0.081 | N | 0.345 | neutral | None | None | None | None | I |
K/E | 0.1377 | likely_benign | 0.1398 | benign | -0.514 | Destabilizing | 0.027 | N | 0.283 | neutral | N | 0.444002473 | None | None | I |
K/F | 0.6616 | likely_pathogenic | 0.6911 | pathogenic | -0.563 | Destabilizing | 0.555 | D | 0.304 | neutral | None | None | None | None | I |
K/G | 0.2468 | likely_benign | 0.2844 | benign | -0.227 | Destabilizing | 0.067 | N | 0.332 | neutral | None | None | None | None | I |
K/H | 0.2379 | likely_benign | 0.2663 | benign | -0.284 | Destabilizing | 0.38 | N | 0.3 | neutral | None | None | None | None | I |
K/I | 0.2781 | likely_benign | 0.2882 | benign | -0.032 | Destabilizing | 0.484 | N | 0.36 | neutral | N | 0.460012075 | None | None | I |
K/L | 0.284 | likely_benign | 0.2973 | benign | -0.032 | Destabilizing | 0.149 | N | 0.419 | neutral | None | None | None | None | I |
K/M | 0.2059 | likely_benign | 0.2149 | benign | -0.32 | Destabilizing | 0.555 | D | 0.302 | neutral | None | None | None | None | I |
K/N | 0.2715 | likely_benign | 0.3022 | benign | -0.246 | Destabilizing | 0.001 | N | 0.106 | neutral | N | 0.459318642 | None | None | I |
K/P | 0.357 | ambiguous | 0.3865 | ambiguous | -0.053 | Destabilizing | 0.555 | D | 0.361 | neutral | None | None | None | None | I |
K/Q | 0.116 | likely_benign | 0.1207 | benign | -0.374 | Destabilizing | None | N | 0.191 | neutral | N | 0.441983675 | None | None | I |
K/R | 0.07 | likely_benign | 0.0708 | benign | -0.324 | Destabilizing | None | N | 0.119 | neutral | N | 0.472517226 | None | None | I |
K/S | 0.2381 | likely_benign | 0.2599 | benign | -0.569 | Destabilizing | 0.007 | N | 0.159 | neutral | None | None | None | None | I |
K/T | 0.124 | likely_benign | 0.1314 | benign | -0.503 | Destabilizing | 0.062 | N | 0.339 | neutral | N | 0.446330702 | None | None | I |
K/V | 0.2282 | likely_benign | 0.242 | benign | -0.053 | Destabilizing | 0.149 | N | 0.395 | neutral | None | None | None | None | I |
K/W | 0.6186 | likely_pathogenic | 0.6661 | pathogenic | -0.682 | Destabilizing | 0.935 | D | 0.331 | neutral | None | None | None | None | I |
K/Y | 0.5046 | ambiguous | 0.5461 | ambiguous | -0.358 | Destabilizing | 0.555 | D | 0.338 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.