Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29790 | 89593;89594;89595 | chr2:178553637;178553636;178553635 | chr2:179418364;179418363;179418362 |
N2AB | 28149 | 84670;84671;84672 | chr2:178553637;178553636;178553635 | chr2:179418364;179418363;179418362 |
N2A | 27222 | 81889;81890;81891 | chr2:178553637;178553636;178553635 | chr2:179418364;179418363;179418362 |
N2B | 20725 | 62398;62399;62400 | chr2:178553637;178553636;178553635 | chr2:179418364;179418363;179418362 |
Novex-1 | 20850 | 62773;62774;62775 | chr2:178553637;178553636;178553635 | chr2:179418364;179418363;179418362 |
Novex-2 | 20917 | 62974;62975;62976 | chr2:178553637;178553636;178553635 | chr2:179418364;179418363;179418362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs775906983 | -0.29 | 0.006 | N | 0.38 | 0.083 | 0.158396225186 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22965E-04 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs775906983 | -0.29 | 0.006 | N | 0.38 | 0.083 | 0.158396225186 | gnomAD-4.0.0 | 6.84184E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.00801E-04 | None | 0 | 0 | 0 | 4.63736E-05 | 3.31301E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3673 | ambiguous | 0.3417 | ambiguous | -1.709 | Destabilizing | 0.006 | N | 0.471 | neutral | N | 0.513051552 | None | None | N |
V/C | 0.7371 | likely_pathogenic | 0.7629 | pathogenic | -1.444 | Destabilizing | 0.985 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/D | 0.7521 | likely_pathogenic | 0.7639 | pathogenic | -1.575 | Destabilizing | 0.864 | D | 0.779 | deleterious | N | 0.472201251 | None | None | N |
V/E | 0.6438 | likely_pathogenic | 0.6694 | pathogenic | -1.374 | Destabilizing | 0.894 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/F | 0.3683 | ambiguous | 0.3633 | ambiguous | -0.983 | Destabilizing | 0.864 | D | 0.717 | prob.delet. | N | 0.476315854 | None | None | N |
V/G | 0.3804 | ambiguous | 0.3876 | ambiguous | -2.224 | Highly Destabilizing | 0.761 | D | 0.733 | prob.delet. | N | 0.477898829 | None | None | N |
V/H | 0.853 | likely_pathogenic | 0.8759 | pathogenic | -1.924 | Destabilizing | 0.995 | D | 0.777 | deleterious | None | None | None | None | N |
V/I | 0.0914 | likely_benign | 0.0919 | benign | -0.291 | Destabilizing | 0.006 | N | 0.38 | neutral | N | 0.471108929 | None | None | N |
V/K | 0.7235 | likely_pathogenic | 0.7561 | pathogenic | -1.087 | Destabilizing | 0.894 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/L | 0.3237 | likely_benign | 0.3013 | benign | -0.291 | Destabilizing | 0.114 | N | 0.511 | neutral | N | 0.479496339 | None | None | N |
V/M | 0.296 | likely_benign | 0.2785 | benign | -0.57 | Destabilizing | 0.894 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/N | 0.5841 | likely_pathogenic | 0.5928 | pathogenic | -1.296 | Destabilizing | 0.945 | D | 0.795 | deleterious | None | None | None | None | N |
V/P | 0.7202 | likely_pathogenic | 0.712 | pathogenic | -0.734 | Destabilizing | 0.945 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/Q | 0.6611 | likely_pathogenic | 0.7039 | pathogenic | -1.147 | Destabilizing | 0.945 | D | 0.747 | deleterious | None | None | None | None | N |
V/R | 0.6954 | likely_pathogenic | 0.7279 | pathogenic | -1.076 | Destabilizing | 0.894 | D | 0.793 | deleterious | None | None | None | None | N |
V/S | 0.4933 | ambiguous | 0.5045 | ambiguous | -2.032 | Highly Destabilizing | 0.809 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/T | 0.412 | ambiguous | 0.4162 | ambiguous | -1.677 | Destabilizing | 0.547 | D | 0.645 | neutral | None | None | None | None | N |
V/W | 0.9088 | likely_pathogenic | 0.9147 | pathogenic | -1.349 | Destabilizing | 0.995 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Y | 0.7239 | likely_pathogenic | 0.7508 | pathogenic | -0.952 | Destabilizing | 0.945 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.