Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29791 | 89596;89597;89598 | chr2:178553634;178553633;178553632 | chr2:179418361;179418360;179418359 |
N2AB | 28150 | 84673;84674;84675 | chr2:178553634;178553633;178553632 | chr2:179418361;179418360;179418359 |
N2A | 27223 | 81892;81893;81894 | chr2:178553634;178553633;178553632 | chr2:179418361;179418360;179418359 |
N2B | 20726 | 62401;62402;62403 | chr2:178553634;178553633;178553632 | chr2:179418361;179418360;179418359 |
Novex-1 | 20851 | 62776;62777;62778 | chr2:178553634;178553633;178553632 | chr2:179418361;179418360;179418359 |
Novex-2 | 20918 | 62977;62978;62979 | chr2:178553634;178553633;178553632 | chr2:179418361;179418360;179418359 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.98 | N | 0.589 | 0.291 | 0.253205268125 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/T | rs1360436599 | -0.062 | 0.99 | N | 0.582 | 0.376 | 0.418095516054 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/T | rs1360436599 | -0.062 | 0.99 | N | 0.582 | 0.376 | 0.418095516054 | gnomAD-4.0.0 | 3.18227E-06 | None | None | None | None | I | None | 0 | 4.57247E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.439 | ambiguous | 0.3893 | ambiguous | -0.093 | Destabilizing | 0.985 | D | 0.566 | neutral | None | None | None | None | I |
R/C | 0.2116 | likely_benign | 0.1712 | benign | -0.321 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
R/D | 0.7037 | likely_pathogenic | 0.651 | pathogenic | -0.117 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | I |
R/E | 0.4278 | ambiguous | 0.383 | ambiguous | -0.071 | Destabilizing | 0.985 | D | 0.56 | neutral | None | None | None | None | I |
R/F | 0.5758 | likely_pathogenic | 0.5137 | ambiguous | -0.387 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
R/G | 0.3052 | likely_benign | 0.262 | benign | -0.253 | Destabilizing | 0.99 | D | 0.562 | neutral | N | 0.466567114 | None | None | I |
R/H | 0.1326 | likely_benign | 0.1158 | benign | -0.636 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
R/I | 0.2984 | likely_benign | 0.2479 | benign | 0.283 | Stabilizing | 0.999 | D | 0.664 | neutral | N | 0.497004665 | None | None | I |
R/K | 0.1079 | likely_benign | 0.1037 | benign | -0.187 | Destabilizing | 0.219 | N | 0.248 | neutral | N | 0.420256035 | None | None | I |
R/L | 0.2665 | likely_benign | 0.2337 | benign | 0.283 | Stabilizing | 0.993 | D | 0.562 | neutral | None | None | None | None | I |
R/M | 0.2956 | likely_benign | 0.2586 | benign | -0.078 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
R/N | 0.5961 | likely_pathogenic | 0.5341 | ambiguous | -0.01 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | I |
R/P | 0.4789 | ambiguous | 0.471 | ambiguous | 0.176 | Stabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | I |
R/Q | 0.1209 | likely_benign | 0.1077 | benign | -0.118 | Destabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | I |
R/S | 0.5562 | ambiguous | 0.4934 | ambiguous | -0.357 | Destabilizing | 0.98 | D | 0.589 | neutral | N | 0.446055769 | None | None | I |
R/T | 0.2839 | likely_benign | 0.2488 | benign | -0.192 | Destabilizing | 0.99 | D | 0.582 | neutral | N | 0.448941359 | None | None | I |
R/V | 0.3754 | ambiguous | 0.3262 | benign | 0.176 | Stabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
R/W | 0.22 | likely_benign | 0.1866 | benign | -0.464 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
R/Y | 0.4459 | ambiguous | 0.384 | ambiguous | -0.059 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.