Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29810 | 89653;89654;89655 | chr2:178553577;178553576;178553575 | chr2:179418304;179418303;179418302 |
N2AB | 28169 | 84730;84731;84732 | chr2:178553577;178553576;178553575 | chr2:179418304;179418303;179418302 |
N2A | 27242 | 81949;81950;81951 | chr2:178553577;178553576;178553575 | chr2:179418304;179418303;179418302 |
N2B | 20745 | 62458;62459;62460 | chr2:178553577;178553576;178553575 | chr2:179418304;179418303;179418302 |
Novex-1 | 20870 | 62833;62834;62835 | chr2:178553577;178553576;178553575 | chr2:179418304;179418303;179418302 |
Novex-2 | 20937 | 63034;63035;63036 | chr2:178553577;178553576;178553575 | chr2:179418304;179418303;179418302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs745716789 | -0.864 | 0.997 | D | 0.65 | 0.377 | 0.746583782714 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs745716789 | -0.864 | 0.997 | D | 0.65 | 0.377 | 0.746583782714 | gnomAD-4.0.0 | 1.59117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.868 | likely_pathogenic | 0.837 | pathogenic | -2.666 | Highly Destabilizing | 0.999 | D | 0.68 | prob.neutral | D | 0.53371685 | None | None | N |
V/C | 0.9562 | likely_pathogenic | 0.9553 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/D | 0.9977 | likely_pathogenic | 0.9976 | pathogenic | -3.622 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/E | 0.9936 | likely_pathogenic | 0.9937 | pathogenic | -3.318 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.629947995 | None | None | N |
V/F | 0.8798 | likely_pathogenic | 0.8568 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/G | 0.932 | likely_pathogenic | 0.9194 | pathogenic | -3.238 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.629947995 | None | None | N |
V/H | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -3.014 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.0992 | likely_benign | 0.0957 | benign | -0.987 | Destabilizing | 0.997 | D | 0.65 | neutral | D | 0.537700147 | None | None | N |
V/K | 0.9944 | likely_pathogenic | 0.9944 | pathogenic | -2.267 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
V/L | 0.7081 | likely_pathogenic | 0.6924 | pathogenic | -0.987 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | N | 0.505467149 | None | None | N |
V/M | 0.7709 | likely_pathogenic | 0.753 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/N | 0.9923 | likely_pathogenic | 0.9912 | pathogenic | -2.914 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/P | 0.995 | likely_pathogenic | 0.994 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/Q | 0.9925 | likely_pathogenic | 0.992 | pathogenic | -2.595 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/R | 0.9896 | likely_pathogenic | 0.9895 | pathogenic | -2.218 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
V/S | 0.9718 | likely_pathogenic | 0.9655 | pathogenic | -3.409 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
V/T | 0.9258 | likely_pathogenic | 0.9187 | pathogenic | -2.963 | Highly Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/W | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -2.096 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/Y | 0.9876 | likely_pathogenic | 0.9862 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.