Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29812 | 89659;89660;89661 | chr2:178553571;178553570;178553569 | chr2:179418298;179418297;179418296 |
N2AB | 28171 | 84736;84737;84738 | chr2:178553571;178553570;178553569 | chr2:179418298;179418297;179418296 |
N2A | 27244 | 81955;81956;81957 | chr2:178553571;178553570;178553569 | chr2:179418298;179418297;179418296 |
N2B | 20747 | 62464;62465;62466 | chr2:178553571;178553570;178553569 | chr2:179418298;179418297;179418296 |
Novex-1 | 20872 | 62839;62840;62841 | chr2:178553571;178553570;178553569 | chr2:179418298;179418297;179418296 |
Novex-2 | 20939 | 63040;63041;63042 | chr2:178553571;178553570;178553569 | chr2:179418298;179418297;179418296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.997 | D | 0.802 | 0.704 | 0.642082960585 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
A/V | None | None | 0.977 | D | 0.715 | 0.575 | 0.742137632746 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8943 | likely_pathogenic | 0.903 | pathogenic | -2.176 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/D | 0.9968 | likely_pathogenic | 0.9975 | pathogenic | -3.268 | Highly Destabilizing | 0.993 | D | 0.795 | deleterious | D | 0.555114971 | None | None | N |
A/E | 0.996 | likely_pathogenic | 0.9967 | pathogenic | -3.095 | Highly Destabilizing | 0.995 | D | 0.788 | deleterious | None | None | None | None | N |
A/F | 0.9939 | likely_pathogenic | 0.9949 | pathogenic | -0.897 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
A/G | 0.4142 | ambiguous | 0.4178 | ambiguous | -1.969 | Destabilizing | 0.955 | D | 0.627 | neutral | N | 0.517639013 | None | None | N |
A/H | 0.9973 | likely_pathogenic | 0.9977 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/I | 0.9827 | likely_pathogenic | 0.9836 | pathogenic | -0.591 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
A/K | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -1.573 | Destabilizing | 0.995 | D | 0.786 | deleterious | None | None | None | None | N |
A/L | 0.9468 | likely_pathogenic | 0.9569 | pathogenic | -0.591 | Destabilizing | 0.983 | D | 0.764 | deleterious | None | None | None | None | N |
A/M | 0.9742 | likely_pathogenic | 0.9757 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
A/N | 0.9917 | likely_pathogenic | 0.9927 | pathogenic | -2.032 | Highly Destabilizing | 0.995 | D | 0.796 | deleterious | None | None | None | None | N |
A/P | 0.9723 | likely_pathogenic | 0.9675 | pathogenic | -0.892 | Destabilizing | 0.997 | D | 0.802 | deleterious | D | 0.528616925 | None | None | N |
A/Q | 0.9918 | likely_pathogenic | 0.9935 | pathogenic | -1.928 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
A/R | 0.9948 | likely_pathogenic | 0.9958 | pathogenic | -1.463 | Destabilizing | 0.995 | D | 0.808 | deleterious | None | None | None | None | N |
A/S | 0.3165 | likely_benign | 0.3054 | benign | -2.331 | Highly Destabilizing | 0.568 | D | 0.368 | neutral | D | 0.524093344 | None | None | N |
A/T | 0.8311 | likely_pathogenic | 0.814 | pathogenic | -2.058 | Highly Destabilizing | 0.955 | D | 0.651 | neutral | D | 0.532954884 | None | None | N |
A/V | 0.8945 | likely_pathogenic | 0.896 | pathogenic | -0.892 | Destabilizing | 0.977 | D | 0.715 | prob.delet. | D | 0.53472931 | None | None | N |
A/W | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/Y | 0.9971 | likely_pathogenic | 0.9976 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.