Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29813 | 89662;89663;89664 | chr2:178553568;178553567;178553566 | chr2:179418295;179418294;179418293 |
N2AB | 28172 | 84739;84740;84741 | chr2:178553568;178553567;178553566 | chr2:179418295;179418294;179418293 |
N2A | 27245 | 81958;81959;81960 | chr2:178553568;178553567;178553566 | chr2:179418295;179418294;179418293 |
N2B | 20748 | 62467;62468;62469 | chr2:178553568;178553567;178553566 | chr2:179418295;179418294;179418293 |
Novex-1 | 20873 | 62842;62843;62844 | chr2:178553568;178553567;178553566 | chr2:179418295;179418294;179418293 |
Novex-2 | 20940 | 63043;63044;63045 | chr2:178553568;178553567;178553566 | chr2:179418295;179418294;179418293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.001 | N | 0.263 | 0.071 | 0.339555952218 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2818 | likely_benign | 0.2456 | benign | -1.666 | Destabilizing | 0.22 | N | 0.518 | neutral | N | 0.51444678 | None | None | I |
V/C | 0.6513 | likely_pathogenic | 0.6246 | pathogenic | -1.525 | Destabilizing | 0.968 | D | 0.624 | neutral | None | None | None | None | I |
V/D | 0.6457 | likely_pathogenic | 0.6322 | pathogenic | -1.827 | Destabilizing | 0.726 | D | 0.74 | deleterious | None | None | None | None | I |
V/E | 0.3559 | ambiguous | 0.3543 | ambiguous | -1.796 | Destabilizing | 0.667 | D | 0.675 | neutral | N | 0.481566357 | None | None | I |
V/F | 0.1794 | likely_benign | 0.1752 | benign | -1.339 | Destabilizing | 0.396 | N | 0.631 | neutral | None | None | None | None | I |
V/G | 0.3824 | ambiguous | 0.3425 | ambiguous | -1.994 | Destabilizing | 0.667 | D | 0.721 | prob.delet. | N | 0.494510512 | None | None | I |
V/H | 0.5908 | likely_pathogenic | 0.5849 | pathogenic | -1.428 | Destabilizing | 0.968 | D | 0.751 | deleterious | None | None | None | None | I |
V/I | 0.0691 | likely_benign | 0.0686 | benign | -0.846 | Destabilizing | 0.001 | N | 0.189 | neutral | N | 0.448107145 | None | None | I |
V/K | 0.3189 | likely_benign | 0.33 | benign | -1.233 | Destabilizing | 0.567 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/L | 0.1623 | likely_benign | 0.1449 | benign | -0.846 | Destabilizing | 0.001 | N | 0.263 | neutral | N | 0.502285559 | None | None | I |
V/M | 0.1265 | likely_benign | 0.1108 | benign | -0.873 | Destabilizing | 0.072 | N | 0.408 | neutral | None | None | None | None | I |
V/N | 0.4235 | ambiguous | 0.4004 | ambiguous | -1.194 | Destabilizing | 0.89 | D | 0.749 | deleterious | None | None | None | None | I |
V/P | 0.9769 | likely_pathogenic | 0.9735 | pathogenic | -1.088 | Destabilizing | 0.89 | D | 0.688 | prob.neutral | None | None | None | None | I |
V/Q | 0.3146 | likely_benign | 0.3071 | benign | -1.381 | Destabilizing | 0.726 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/R | 0.287 | likely_benign | 0.295 | benign | -0.757 | Destabilizing | 0.726 | D | 0.745 | deleterious | None | None | None | None | I |
V/S | 0.3156 | likely_benign | 0.2959 | benign | -1.765 | Destabilizing | 0.726 | D | 0.639 | neutral | None | None | None | None | I |
V/T | 0.2136 | likely_benign | 0.2118 | benign | -1.622 | Destabilizing | 0.272 | N | 0.475 | neutral | None | None | None | None | I |
V/W | 0.759 | likely_pathogenic | 0.7499 | pathogenic | -1.51 | Destabilizing | 0.968 | D | 0.743 | deleterious | None | None | None | None | I |
V/Y | 0.5001 | ambiguous | 0.501 | ambiguous | -1.193 | Destabilizing | 0.726 | D | 0.626 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.