Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2982 | 9169;9170;9171 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
N2AB | 2982 | 9169;9170;9171 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
N2A | 2982 | 9169;9170;9171 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
N2B | 2936 | 9031;9032;9033 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
Novex-1 | 2936 | 9031;9032;9033 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
Novex-2 | 2936 | 9031;9032;9033 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
Novex-3 | 2982 | 9169;9170;9171 | chr2:178768892;178768891;178768890 | chr2:179633619;179633618;179633617 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2090998936 | None | 1.0 | D | 0.652 | 0.545 | 0.446111551642 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9584 | likely_pathogenic | 0.9423 | pathogenic | -0.883 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.475171451 | None | None | N |
E/C | 0.9993 | likely_pathogenic | 0.9988 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/D | 0.9885 | likely_pathogenic | 0.9811 | pathogenic | -1.234 | Destabilizing | 0.999 | D | 0.444 | neutral | D | 0.530584517 | None | None | N |
E/F | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/G | 0.9586 | likely_pathogenic | 0.9422 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.652 | neutral | D | 0.624645129 | None | None | N |
E/H | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/I | 0.9931 | likely_pathogenic | 0.9893 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/K | 0.9794 | likely_pathogenic | 0.9719 | pathogenic | -0.741 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.491816609 | None | None | N |
E/L | 0.9961 | likely_pathogenic | 0.9942 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/M | 0.9931 | likely_pathogenic | 0.9906 | pathogenic | 0.677 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/N | 0.996 | likely_pathogenic | 0.9941 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/P | 0.996 | likely_pathogenic | 0.9949 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/Q | 0.9541 | likely_pathogenic | 0.9383 | pathogenic | -1.064 | Destabilizing | 1.0 | D | 0.627 | neutral | D | 0.622762584 | None | None | N |
E/R | 0.9901 | likely_pathogenic | 0.9833 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/S | 0.9916 | likely_pathogenic | 0.9876 | pathogenic | -1.572 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
E/T | 0.992 | likely_pathogenic | 0.9891 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/V | 0.9816 | likely_pathogenic | 0.9729 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.499238031 | None | None | N |
E/W | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/Y | 0.9991 | likely_pathogenic | 0.9985 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.