Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29820 | 89683;89684;89685 | chr2:178553547;178553546;178553545 | chr2:179418274;179418273;179418272 |
N2AB | 28179 | 84760;84761;84762 | chr2:178553547;178553546;178553545 | chr2:179418274;179418273;179418272 |
N2A | 27252 | 81979;81980;81981 | chr2:178553547;178553546;178553545 | chr2:179418274;179418273;179418272 |
N2B | 20755 | 62488;62489;62490 | chr2:178553547;178553546;178553545 | chr2:179418274;179418273;179418272 |
Novex-1 | 20880 | 62863;62864;62865 | chr2:178553547;178553546;178553545 | chr2:179418274;179418273;179418272 |
Novex-2 | 20947 | 63064;63065;63066 | chr2:178553547;178553546;178553545 | chr2:179418274;179418273;179418272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1700193837 | None | 0.984 | N | 0.535 | 0.299 | 0.417334834585 | gnomAD-4.0.0 | 2.0528E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69858E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1743 | likely_benign | 0.1661 | benign | -0.298 | Destabilizing | 0.992 | D | 0.603 | neutral | N | 0.516537362 | None | None | I |
E/C | 0.7936 | likely_pathogenic | 0.7903 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
E/D | 0.1053 | likely_benign | 0.1031 | benign | -0.316 | Destabilizing | 0.996 | D | 0.535 | neutral | N | 0.476557608 | None | None | I |
E/F | 0.6717 | likely_pathogenic | 0.6655 | pathogenic | -0.254 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/G | 0.2226 | likely_benign | 0.2059 | benign | -0.46 | Destabilizing | 0.999 | D | 0.64 | neutral | N | 0.472672231 | None | None | I |
E/H | 0.4453 | ambiguous | 0.4559 | ambiguous | 0.084 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
E/I | 0.2653 | likely_benign | 0.2694 | benign | 0.083 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
E/K | 0.1232 | likely_benign | 0.1261 | benign | 0.471 | Stabilizing | 0.984 | D | 0.535 | neutral | N | 0.508360596 | None | None | I |
E/L | 0.3019 | likely_benign | 0.3065 | benign | 0.083 | Stabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/M | 0.3704 | ambiguous | 0.3725 | ambiguous | 0.128 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/N | 0.2162 | likely_benign | 0.2186 | benign | 0.144 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/P | 0.3929 | ambiguous | 0.4043 | ambiguous | -0.025 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/Q | 0.1342 | likely_benign | 0.1353 | benign | 0.163 | Stabilizing | 0.992 | D | 0.659 | neutral | N | 0.510246108 | None | None | I |
E/R | 0.246 | likely_benign | 0.2471 | benign | 0.64 | Stabilizing | 0.538 | D | 0.341 | neutral | None | None | None | None | I |
E/S | 0.1994 | likely_benign | 0.1983 | benign | 0.013 | Stabilizing | 0.997 | D | 0.648 | neutral | None | None | None | None | I |
E/T | 0.2139 | likely_benign | 0.2187 | benign | 0.151 | Stabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | I |
E/V | 0.1852 | likely_benign | 0.1803 | benign | -0.025 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.471737633 | None | None | I |
E/W | 0.8821 | likely_pathogenic | 0.8826 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/Y | 0.5388 | ambiguous | 0.5471 | ambiguous | -0.011 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.