Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29821 | 89686;89687;89688 | chr2:178553544;178553543;178553542 | chr2:179418271;179418270;179418269 |
N2AB | 28180 | 84763;84764;84765 | chr2:178553544;178553543;178553542 | chr2:179418271;179418270;179418269 |
N2A | 27253 | 81982;81983;81984 | chr2:178553544;178553543;178553542 | chr2:179418271;179418270;179418269 |
N2B | 20756 | 62491;62492;62493 | chr2:178553544;178553543;178553542 | chr2:179418271;179418270;179418269 |
Novex-1 | 20881 | 62866;62867;62868 | chr2:178553544;178553543;178553542 | chr2:179418271;179418270;179418269 |
Novex-2 | 20948 | 63067;63068;63069 | chr2:178553544;178553543;178553542 | chr2:179418271;179418270;179418269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1469989307 | None | 0.134 | N | 0.283 | 0.193 | 0.149567049428 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/A | rs1469989307 | None | 0.134 | N | 0.283 | 0.193 | 0.149567049428 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | I | None | 0 | 0 | None | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.31 | N | 0.299 | 0.261 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0932 | likely_benign | 0.0894 | benign | -1.669 | Destabilizing | 0.134 | N | 0.283 | neutral | N | 0.463745008 | None | None | I |
P/C | 0.5273 | ambiguous | 0.5219 | ambiguous | -1.11 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
P/D | 0.6427 | likely_pathogenic | 0.6027 | pathogenic | -1.733 | Destabilizing | 0.02 | N | 0.289 | neutral | None | None | None | None | I |
P/E | 0.5763 | likely_pathogenic | 0.541 | ambiguous | -1.75 | Destabilizing | 0.884 | D | 0.495 | neutral | None | None | None | None | I |
P/F | 0.5665 | likely_pathogenic | 0.5376 | ambiguous | -1.338 | Destabilizing | 0.997 | D | 0.657 | neutral | None | None | None | None | I |
P/G | 0.3869 | ambiguous | 0.3881 | ambiguous | -1.963 | Destabilizing | 0.863 | D | 0.52 | neutral | None | None | None | None | I |
P/H | 0.3055 | likely_benign | 0.2829 | benign | -1.41 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.494917543 | None | None | I |
P/I | 0.5774 | likely_pathogenic | 0.5292 | ambiguous | -0.956 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | I |
P/K | 0.5539 | ambiguous | 0.5325 | ambiguous | -1.357 | Destabilizing | 0.939 | D | 0.481 | neutral | None | None | None | None | I |
P/L | 0.3544 | ambiguous | 0.32 | benign | -0.956 | Destabilizing | 0.92 | D | 0.589 | neutral | N | 0.492636137 | None | None | I |
P/M | 0.5256 | ambiguous | 0.4908 | ambiguous | -0.725 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
P/N | 0.5197 | ambiguous | 0.4902 | ambiguous | -1.131 | Destabilizing | 0.939 | D | 0.561 | neutral | None | None | None | None | I |
P/Q | 0.3755 | ambiguous | 0.3551 | ambiguous | -1.375 | Destabilizing | 0.991 | D | 0.533 | neutral | None | None | None | None | I |
P/R | 0.4252 | ambiguous | 0.4037 | ambiguous | -0.739 | Destabilizing | 0.988 | D | 0.602 | neutral | N | 0.50525989 | None | None | I |
P/S | 0.1879 | likely_benign | 0.1793 | benign | -1.609 | Destabilizing | 0.31 | N | 0.299 | neutral | N | 0.481622227 | None | None | I |
P/T | 0.2158 | likely_benign | 0.2004 | benign | -1.531 | Destabilizing | 0.852 | D | 0.505 | neutral | N | 0.485763283 | None | None | I |
P/V | 0.3894 | ambiguous | 0.3599 | ambiguous | -1.161 | Destabilizing | 0.939 | D | 0.545 | neutral | None | None | None | None | I |
P/W | 0.7363 | likely_pathogenic | 0.7035 | pathogenic | -1.474 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
P/Y | 0.5276 | ambiguous | 0.5009 | ambiguous | -1.228 | Destabilizing | 0.997 | D | 0.662 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.