Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29826 | 89701;89702;89703 | chr2:178553529;178553528;178553527 | chr2:179418256;179418255;179418254 |
N2AB | 28185 | 84778;84779;84780 | chr2:178553529;178553528;178553527 | chr2:179418256;179418255;179418254 |
N2A | 27258 | 81997;81998;81999 | chr2:178553529;178553528;178553527 | chr2:179418256;179418255;179418254 |
N2B | 20761 | 62506;62507;62508 | chr2:178553529;178553528;178553527 | chr2:179418256;179418255;179418254 |
Novex-1 | 20886 | 62881;62882;62883 | chr2:178553529;178553528;178553527 | chr2:179418256;179418255;179418254 |
Novex-2 | 20953 | 63082;63083;63084 | chr2:178553529;178553528;178553527 | chr2:179418256;179418255;179418254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs1345868585 | 0.313 | 0.993 | N | 0.507 | 0.356 | 0.527709697666 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs1345868585 | 0.313 | 0.993 | N | 0.507 | 0.356 | 0.527709697666 | gnomAD-4.0.0 | 1.59277E-06 | None | None | None | None | N | None | 0 | 2.28896E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1545 | likely_benign | 0.1558 | benign | -0.229 | Destabilizing | 0.953 | D | 0.503 | neutral | N | 0.502893274 | None | None | N |
E/C | 0.7909 | likely_pathogenic | 0.7968 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/D | 0.1038 | likely_benign | 0.1114 | benign | -0.204 | Destabilizing | 0.893 | D | 0.469 | neutral | N | 0.453235245 | None | None | N |
E/F | 0.6835 | likely_pathogenic | 0.6849 | pathogenic | -0.102 | Destabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | N |
E/G | 0.1645 | likely_benign | 0.1713 | benign | -0.394 | Destabilizing | 0.976 | D | 0.516 | neutral | N | 0.485059661 | None | None | N |
E/H | 0.4246 | ambiguous | 0.4443 | ambiguous | 0.464 | Stabilizing | 0.995 | D | 0.568 | neutral | None | None | None | None | N |
E/I | 0.279 | likely_benign | 0.2835 | benign | 0.164 | Stabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.1485 | likely_benign | 0.1433 | benign | 0.165 | Stabilizing | 0.91 | D | 0.519 | neutral | N | 0.496756735 | None | None | N |
E/L | 0.3386 | likely_benign | 0.3397 | benign | 0.164 | Stabilizing | 0.99 | D | 0.539 | neutral | None | None | None | None | N |
E/M | 0.4071 | ambiguous | 0.394 | ambiguous | -0.076 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/N | 0.2243 | likely_benign | 0.2368 | benign | -0.059 | Destabilizing | 0.995 | D | 0.531 | neutral | None | None | None | None | N |
E/P | 0.6587 | likely_pathogenic | 0.6497 | pathogenic | 0.051 | Stabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
E/Q | 0.1349 | likely_benign | 0.1361 | benign | -0.024 | Destabilizing | 0.441 | N | 0.158 | neutral | N | 0.466665902 | None | None | N |
E/R | 0.2703 | likely_benign | 0.2792 | benign | 0.529 | Stabilizing | 0.964 | D | 0.53 | neutral | None | None | None | None | N |
E/S | 0.1754 | likely_benign | 0.19 | benign | -0.266 | Destabilizing | 0.964 | D | 0.449 | neutral | None | None | None | None | N |
E/T | 0.1644 | likely_benign | 0.1759 | benign | -0.128 | Destabilizing | 0.982 | D | 0.565 | neutral | None | None | None | None | N |
E/V | 0.1779 | likely_benign | 0.1782 | benign | 0.051 | Stabilizing | 0.993 | D | 0.507 | neutral | N | 0.517574725 | None | None | N |
E/W | 0.8971 | likely_pathogenic | 0.8912 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/Y | 0.5498 | ambiguous | 0.5495 | ambiguous | 0.13 | Stabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.