Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2983 | 9172;9173;9174 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
N2AB | 2983 | 9172;9173;9174 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
N2A | 2983 | 9172;9173;9174 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
N2B | 2937 | 9034;9035;9036 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
Novex-1 | 2937 | 9034;9035;9036 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
Novex-2 | 2937 | 9034;9035;9036 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
Novex-3 | 2983 | 9172;9173;9174 | chr2:178768889;178768888;178768887 | chr2:179633616;179633615;179633614 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1387550627 | None | 0.217 | N | 0.368 | 0.195 | 0.264547087235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1387550627 | None | 0.217 | N | 0.368 | 0.195 | 0.264547087235 | gnomAD-4.0.0 | 6.56909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46959E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9541 | likely_pathogenic | 0.9358 | pathogenic | 0.078 | Stabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
K/C | 0.9819 | likely_pathogenic | 0.9774 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
K/D | 0.9645 | likely_pathogenic | 0.9505 | pathogenic | -0.031 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
K/E | 0.8954 | likely_pathogenic | 0.8485 | pathogenic | -0.029 | Destabilizing | 0.989 | D | 0.581 | neutral | N | 0.506333618 | None | None | N |
K/F | 0.9896 | likely_pathogenic | 0.9877 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/G | 0.799 | likely_pathogenic | 0.7676 | pathogenic | -0.13 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
K/H | 0.7858 | likely_pathogenic | 0.767 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
K/I | 0.9874 | likely_pathogenic | 0.9777 | pathogenic | 0.552 | Stabilizing | 0.999 | D | 0.647 | neutral | D | 0.585113543 | None | None | N |
K/L | 0.9241 | likely_pathogenic | 0.9077 | pathogenic | 0.552 | Stabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
K/M | 0.8453 | likely_pathogenic | 0.8104 | pathogenic | 0.378 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
K/N | 0.8819 | likely_pathogenic | 0.85 | pathogenic | 0.371 | Stabilizing | 0.998 | D | 0.621 | neutral | N | 0.508096287 | None | None | N |
K/P | 0.9966 | likely_pathogenic | 0.994 | pathogenic | 0.422 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/Q | 0.6729 | likely_pathogenic | 0.6362 | pathogenic | 0.168 | Stabilizing | 0.997 | D | 0.63 | neutral | D | 0.539891177 | None | None | N |
K/R | 0.1919 | likely_benign | 0.188 | benign | 0.043 | Stabilizing | 0.217 | N | 0.368 | neutral | N | 0.487852958 | None | None | N |
K/S | 0.9543 | likely_pathogenic | 0.9389 | pathogenic | -0.083 | Destabilizing | 0.996 | D | 0.604 | neutral | None | None | None | None | N |
K/T | 0.8936 | likely_pathogenic | 0.852 | pathogenic | 0.062 | Stabilizing | 0.998 | D | 0.607 | neutral | N | 0.507974338 | None | None | N |
K/V | 0.9771 | likely_pathogenic | 0.9631 | pathogenic | 0.422 | Stabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
K/W | 0.9811 | likely_pathogenic | 0.9783 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
K/Y | 0.9583 | likely_pathogenic | 0.9507 | pathogenic | 0.228 | Stabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.