Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29843 | 89752;89753;89754 | chr2:178553373;178553372;178553371 | chr2:179418100;179418099;179418098 |
N2AB | 28202 | 84829;84830;84831 | chr2:178553373;178553372;178553371 | chr2:179418100;179418099;179418098 |
N2A | 27275 | 82048;82049;82050 | chr2:178553373;178553372;178553371 | chr2:179418100;179418099;179418098 |
N2B | 20778 | 62557;62558;62559 | chr2:178553373;178553372;178553371 | chr2:179418100;179418099;179418098 |
Novex-1 | 20903 | 62932;62933;62934 | chr2:178553373;178553372;178553371 | chr2:179418100;179418099;179418098 |
Novex-2 | 20970 | 63133;63134;63135 | chr2:178553373;178553372;178553371 | chr2:179418100;179418099;179418098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.37 | N | 0.289 | 0.182 | 0.397391247328 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/E | None | None | 0.997 | N | 0.611 | 0.476 | 0.782665743468 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/M | rs376014865 | None | 0.997 | N | 0.501 | 0.207 | None | gnomAD-4.0.0 | 1.38498E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81122E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3143 | likely_benign | 0.2569 | benign | -0.274 | Destabilizing | 0.37 | N | 0.289 | neutral | N | 0.413498713 | None | None | N |
V/C | 0.9071 | likely_pathogenic | 0.8867 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.554 | neutral | None | None | None | None | N |
V/D | 0.6921 | likely_pathogenic | 0.6121 | pathogenic | -0.215 | Destabilizing | 0.998 | D | 0.644 | neutral | None | None | None | None | N |
V/E | 0.6394 | likely_pathogenic | 0.5604 | ambiguous | -0.338 | Destabilizing | 0.997 | D | 0.611 | neutral | N | 0.498501466 | None | None | N |
V/F | 0.35 | ambiguous | 0.288 | benign | -0.623 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
V/G | 0.472 | ambiguous | 0.398 | ambiguous | -0.365 | Destabilizing | 0.994 | D | 0.564 | neutral | N | 0.499272258 | None | None | N |
V/H | 0.8663 | likely_pathogenic | 0.8177 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
V/I | 0.0963 | likely_benign | 0.0905 | benign | -0.19 | Destabilizing | 0.437 | N | 0.286 | neutral | None | None | None | None | N |
V/K | 0.7079 | likely_pathogenic | 0.6587 | pathogenic | -0.308 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
V/L | 0.3973 | ambiguous | 0.3599 | ambiguous | -0.19 | Destabilizing | 0.9 | D | 0.425 | neutral | N | 0.498848183 | None | None | N |
V/M | 0.2744 | likely_benign | 0.2294 | benign | -0.331 | Destabilizing | 0.997 | D | 0.501 | neutral | N | 0.499272258 | None | None | N |
V/N | 0.5979 | likely_pathogenic | 0.5248 | ambiguous | -0.07 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
V/P | 0.6914 | likely_pathogenic | 0.6434 | pathogenic | -0.186 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
V/Q | 0.6972 | likely_pathogenic | 0.6241 | pathogenic | -0.302 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
V/R | 0.6804 | likely_pathogenic | 0.6175 | pathogenic | 0.165 | Stabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
V/S | 0.4581 | ambiguous | 0.39 | ambiguous | -0.396 | Destabilizing | 0.99 | D | 0.508 | neutral | None | None | None | None | N |
V/T | 0.349 | ambiguous | 0.2978 | benign | -0.422 | Destabilizing | 0.983 | D | 0.46 | neutral | None | None | None | None | N |
V/W | 0.9384 | likely_pathogenic | 0.9064 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/Y | 0.786 | likely_pathogenic | 0.7235 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.