Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29845 | 89758;89759;89760 | chr2:178553367;178553366;178553365 | chr2:179418094;179418093;179418092 |
N2AB | 28204 | 84835;84836;84837 | chr2:178553367;178553366;178553365 | chr2:179418094;179418093;179418092 |
N2A | 27277 | 82054;82055;82056 | chr2:178553367;178553366;178553365 | chr2:179418094;179418093;179418092 |
N2B | 20780 | 62563;62564;62565 | chr2:178553367;178553366;178553365 | chr2:179418094;179418093;179418092 |
Novex-1 | 20905 | 62938;62939;62940 | chr2:178553367;178553366;178553365 | chr2:179418094;179418093;179418092 |
Novex-2 | 20972 | 63139;63140;63141 | chr2:178553367;178553366;178553365 | chr2:179418094;179418093;179418092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.055 | N | 0.589 | 0.192 | 0.275641507738 | gnomAD-4.0.0 | 1.63021E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4453E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6928 | likely_pathogenic | 0.6601 | pathogenic | -1.435 | Destabilizing | 0.272 | N | 0.573 | neutral | None | None | None | None | N |
L/C | 0.775 | likely_pathogenic | 0.7593 | pathogenic | -0.949 | Destabilizing | 0.968 | D | 0.659 | neutral | None | None | None | None | N |
L/D | 0.9552 | likely_pathogenic | 0.9509 | pathogenic | -0.597 | Destabilizing | 0.89 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/E | 0.8208 | likely_pathogenic | 0.8004 | pathogenic | -0.611 | Destabilizing | 0.726 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/F | 0.2368 | likely_benign | 0.1974 | benign | -1.076 | Destabilizing | 0.002 | N | 0.309 | neutral | D | 0.534539624 | None | None | N |
L/G | 0.8411 | likely_pathogenic | 0.8194 | pathogenic | -1.74 | Destabilizing | 0.726 | D | 0.684 | prob.neutral | None | None | None | None | N |
L/H | 0.6549 | likely_pathogenic | 0.6138 | pathogenic | -1.033 | Destabilizing | 0.883 | D | 0.709 | prob.delet. | D | 0.522105557 | None | None | N |
L/I | 0.2348 | likely_benign | 0.2232 | benign | -0.688 | Destabilizing | 0.124 | N | 0.559 | neutral | D | 0.533576832 | None | None | N |
L/K | 0.7014 | likely_pathogenic | 0.6704 | pathogenic | -0.929 | Destabilizing | 0.726 | D | 0.655 | neutral | None | None | None | None | N |
L/M | 0.1569 | likely_benign | 0.1584 | benign | -0.556 | Destabilizing | 0.014 | N | 0.334 | neutral | None | None | None | None | N |
L/N | 0.8099 | likely_pathogenic | 0.7971 | pathogenic | -0.68 | Destabilizing | 0.89 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/P | 0.8994 | likely_pathogenic | 0.8524 | pathogenic | -0.904 | Destabilizing | 0.859 | D | 0.721 | prob.delet. | D | 0.539449344 | None | None | N |
L/Q | 0.4874 | ambiguous | 0.4527 | ambiguous | -0.836 | Destabilizing | 0.726 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/R | 0.6323 | likely_pathogenic | 0.5923 | pathogenic | -0.409 | Destabilizing | 0.667 | D | 0.686 | prob.neutral | D | 0.528346528 | None | None | N |
L/S | 0.7541 | likely_pathogenic | 0.7269 | pathogenic | -1.315 | Destabilizing | 0.726 | D | 0.637 | neutral | None | None | None | None | N |
L/T | 0.6704 | likely_pathogenic | 0.6419 | pathogenic | -1.203 | Destabilizing | 0.726 | D | 0.625 | neutral | None | None | None | None | N |
L/V | 0.2441 | likely_benign | 0.227 | benign | -0.904 | Destabilizing | 0.055 | N | 0.589 | neutral | N | 0.503464189 | None | None | N |
L/W | 0.4694 | ambiguous | 0.4034 | ambiguous | -1.121 | Destabilizing | 0.909 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/Y | 0.6006 | likely_pathogenic | 0.5575 | ambiguous | -0.894 | Destabilizing | 0.396 | N | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.