Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29847 | 89764;89765;89766 | chr2:178553361;178553360;178553359 | chr2:179418088;179418087;179418086 |
N2AB | 28206 | 84841;84842;84843 | chr2:178553361;178553360;178553359 | chr2:179418088;179418087;179418086 |
N2A | 27279 | 82060;82061;82062 | chr2:178553361;178553360;178553359 | chr2:179418088;179418087;179418086 |
N2B | 20782 | 62569;62570;62571 | chr2:178553361;178553360;178553359 | chr2:179418088;179418087;179418086 |
Novex-1 | 20907 | 62944;62945;62946 | chr2:178553361;178553360;178553359 | chr2:179418088;179418087;179418086 |
Novex-2 | 20974 | 63145;63146;63147 | chr2:178553361;178553360;178553359 | chr2:179418088;179418087;179418086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs760372724 | -0.07 | 0.638 | N | 0.521 | 0.334 | 0.42264334713 | gnomAD-2.1.1 | 8.3E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.65E-05 | None | 0 | 0 | 0 |
T/I | rs760372724 | -0.07 | 0.638 | N | 0.521 | 0.334 | 0.42264334713 | gnomAD-4.0.0 | 1.38176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.33019E-05 | 0 |
T/N | None | None | 0.468 | N | 0.47 | 0.241 | 0.307966526162 | gnomAD-4.0.0 | 6.90878E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0362E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.146 | likely_benign | 0.141 | benign | -0.367 | Destabilizing | 0.094 | N | 0.544 | neutral | N | 0.474544384 | None | None | N |
T/C | 0.6685 | likely_pathogenic | 0.6207 | pathogenic | -0.2 | Destabilizing | 0.947 | D | 0.531 | neutral | None | None | None | None | N |
T/D | 0.5457 | ambiguous | 0.5218 | ambiguous | 0.423 | Stabilizing | 0.25 | N | 0.487 | neutral | None | None | None | None | N |
T/E | 0.4546 | ambiguous | 0.4557 | ambiguous | 0.342 | Stabilizing | 0.25 | N | 0.514 | neutral | None | None | None | None | N |
T/F | 0.5805 | likely_pathogenic | 0.5309 | ambiguous | -0.946 | Destabilizing | 0.826 | D | 0.574 | neutral | None | None | None | None | N |
T/G | 0.2936 | likely_benign | 0.2924 | benign | -0.472 | Destabilizing | 0.25 | N | 0.503 | neutral | None | None | None | None | N |
T/H | 0.3967 | ambiguous | 0.3906 | ambiguous | -0.855 | Destabilizing | 0.947 | D | 0.569 | neutral | None | None | None | None | N |
T/I | 0.4784 | ambiguous | 0.4462 | ambiguous | -0.212 | Destabilizing | 0.638 | D | 0.521 | neutral | N | 0.516855154 | None | None | N |
T/K | 0.285 | likely_benign | 0.3031 | benign | -0.203 | Destabilizing | 0.25 | N | 0.503 | neutral | None | None | None | None | N |
T/L | 0.2297 | likely_benign | 0.2234 | benign | -0.212 | Destabilizing | 0.399 | N | 0.507 | neutral | None | None | None | None | N |
T/M | 0.1836 | likely_benign | 0.179 | benign | 0.022 | Stabilizing | 0.982 | D | 0.521 | neutral | None | None | None | None | N |
T/N | 0.17 | likely_benign | 0.1721 | benign | 0.007 | Stabilizing | 0.468 | N | 0.47 | neutral | N | 0.471581437 | None | None | N |
T/P | 0.301 | likely_benign | 0.2623 | benign | -0.236 | Destabilizing | 0.638 | D | 0.52 | neutral | N | 0.468293203 | None | None | N |
T/Q | 0.306 | likely_benign | 0.3243 | benign | -0.212 | Destabilizing | 0.057 | N | 0.337 | neutral | None | None | None | None | N |
T/R | 0.3099 | likely_benign | 0.3157 | benign | -0.028 | Destabilizing | 0.7 | D | 0.519 | neutral | None | None | None | None | N |
T/S | 0.1562 | likely_benign | 0.1574 | benign | -0.23 | Destabilizing | 0.002 | N | 0.334 | neutral | N | 0.42875338 | None | None | N |
T/V | 0.3312 | likely_benign | 0.3065 | benign | -0.236 | Destabilizing | 0.399 | N | 0.492 | neutral | None | None | None | None | N |
T/W | 0.829 | likely_pathogenic | 0.7905 | pathogenic | -0.952 | Destabilizing | 0.982 | D | 0.612 | neutral | None | None | None | None | N |
T/Y | 0.497 | ambiguous | 0.4469 | ambiguous | -0.652 | Destabilizing | 0.826 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.