Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29848 | 89767;89768;89769 | chr2:178553358;178553357;178553356 | chr2:179418085;179418084;179418083 |
N2AB | 28207 | 84844;84845;84846 | chr2:178553358;178553357;178553356 | chr2:179418085;179418084;179418083 |
N2A | 27280 | 82063;82064;82065 | chr2:178553358;178553357;178553356 | chr2:179418085;179418084;179418083 |
N2B | 20783 | 62572;62573;62574 | chr2:178553358;178553357;178553356 | chr2:179418085;179418084;179418083 |
Novex-1 | 20908 | 62947;62948;62949 | chr2:178553358;178553357;178553356 | chr2:179418085;179418084;179418083 |
Novex-2 | 20975 | 63148;63149;63150 | chr2:178553358;178553357;178553356 | chr2:179418085;179418084;179418083 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.98 | N | 0.421 | 0.176 | 0.132336055621 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0939 | likely_benign | 0.0849 | benign | -0.616 | Destabilizing | 0.91 | D | 0.371 | neutral | N | 0.42015446 | None | None | I |
S/C | 0.1427 | likely_benign | 0.1316 | benign | -0.368 | Destabilizing | 1.0 | D | 0.494 | neutral | N | 0.498231242 | None | None | I |
S/D | 0.6322 | likely_pathogenic | 0.5964 | pathogenic | 0.33 | Stabilizing | 0.97 | D | 0.345 | neutral | None | None | None | None | I |
S/E | 0.6519 | likely_pathogenic | 0.636 | pathogenic | 0.251 | Stabilizing | 0.871 | D | 0.38 | neutral | None | None | None | None | I |
S/F | 0.3261 | likely_benign | 0.2669 | benign | -1.171 | Destabilizing | 0.998 | D | 0.552 | neutral | N | 0.483704506 | None | None | I |
S/G | 0.124 | likely_benign | 0.1131 | benign | -0.743 | Destabilizing | 0.965 | D | 0.368 | neutral | None | None | None | None | I |
S/H | 0.4033 | ambiguous | 0.3983 | ambiguous | -1.329 | Destabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | I |
S/I | 0.2619 | likely_benign | 0.2169 | benign | -0.405 | Destabilizing | 0.999 | D | 0.534 | neutral | None | None | None | None | I |
S/K | 0.7818 | likely_pathogenic | 0.7791 | pathogenic | -0.453 | Destabilizing | 0.942 | D | 0.361 | neutral | None | None | None | None | I |
S/L | 0.1619 | likely_benign | 0.1341 | benign | -0.405 | Destabilizing | 0.97 | D | 0.477 | neutral | None | None | None | None | I |
S/M | 0.2428 | likely_benign | 0.2077 | benign | -0.057 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
S/N | 0.1876 | likely_benign | 0.1747 | benign | -0.193 | Destabilizing | 0.985 | D | 0.407 | neutral | None | None | None | None | I |
S/P | 0.7508 | likely_pathogenic | 0.6718 | pathogenic | -0.447 | Destabilizing | 0.998 | D | 0.421 | neutral | N | 0.426560357 | None | None | I |
S/Q | 0.5505 | ambiguous | 0.5423 | ambiguous | -0.446 | Destabilizing | 0.559 | D | 0.187 | neutral | None | None | None | None | I |
S/R | 0.7 | likely_pathogenic | 0.6978 | pathogenic | -0.344 | Destabilizing | 0.97 | D | 0.426 | neutral | None | None | None | None | I |
S/T | 0.0856 | likely_benign | 0.0759 | benign | -0.345 | Destabilizing | 0.98 | D | 0.421 | neutral | N | 0.355796337 | None | None | I |
S/V | 0.2185 | likely_benign | 0.1847 | benign | -0.447 | Destabilizing | 0.985 | D | 0.493 | neutral | None | None | None | None | I |
S/W | 0.4612 | ambiguous | 0.4116 | ambiguous | -1.114 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
S/Y | 0.2619 | likely_benign | 0.2309 | benign | -0.852 | Destabilizing | 0.998 | D | 0.543 | neutral | N | 0.497884525 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.