Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29853 | 89782;89783;89784 | chr2:178553343;178553342;178553341 | chr2:179418070;179418069;179418068 |
N2AB | 28212 | 84859;84860;84861 | chr2:178553343;178553342;178553341 | chr2:179418070;179418069;179418068 |
N2A | 27285 | 82078;82079;82080 | chr2:178553343;178553342;178553341 | chr2:179418070;179418069;179418068 |
N2B | 20788 | 62587;62588;62589 | chr2:178553343;178553342;178553341 | chr2:179418070;179418069;179418068 |
Novex-1 | 20913 | 62962;62963;62964 | chr2:178553343;178553342;178553341 | chr2:179418070;179418069;179418068 |
Novex-2 | 20980 | 63163;63164;63165 | chr2:178553343;178553342;178553341 | chr2:179418070;179418069;179418068 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1337052263 | None | 1.0 | N | 0.721 | 0.326 | 0.253726318573 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs1337052263 | None | 1.0 | N | 0.721 | 0.326 | 0.253726318573 | gnomAD-4.0.0 | 6.57142E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.712 | likely_pathogenic | 0.6924 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
A/D | 0.7918 | likely_pathogenic | 0.7618 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.8 | deleterious | N | 0.480837488 | None | None | I |
A/E | 0.6827 | likely_pathogenic | 0.6619 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
A/F | 0.7686 | likely_pathogenic | 0.7364 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
A/G | 0.3597 | ambiguous | 0.3262 | benign | -0.67 | Destabilizing | 1.0 | D | 0.56 | neutral | N | 0.507589024 | None | None | I |
A/H | 0.7915 | likely_pathogenic | 0.7881 | pathogenic | -0.695 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
A/I | 0.6452 | likely_pathogenic | 0.5751 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
A/K | 0.8077 | likely_pathogenic | 0.8178 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
A/L | 0.6044 | likely_pathogenic | 0.56 | ambiguous | -0.531 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
A/M | 0.5904 | likely_pathogenic | 0.5271 | ambiguous | -0.418 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
A/N | 0.6566 | likely_pathogenic | 0.6129 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
A/P | 0.9036 | likely_pathogenic | 0.8546 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.461719275 | None | None | I |
A/Q | 0.6427 | likely_pathogenic | 0.6513 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
A/R | 0.7147 | likely_pathogenic | 0.7315 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
A/S | 0.1616 | likely_benign | 0.1526 | benign | -0.777 | Destabilizing | 1.0 | D | 0.571 | neutral | N | 0.506445293 | None | None | I |
A/T | 0.333 | likely_benign | 0.2937 | benign | -0.852 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.468467225 | None | None | I |
A/V | 0.3158 | likely_benign | 0.2566 | benign | -0.512 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.496110869 | None | None | I |
A/W | 0.9494 | likely_pathogenic | 0.9372 | pathogenic | -1.24 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
A/Y | 0.8138 | likely_pathogenic | 0.7927 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.