Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29863 | 89812;89813;89814 | chr2:178553313;178553312;178553311 | chr2:179418040;179418039;179418038 |
N2AB | 28222 | 84889;84890;84891 | chr2:178553313;178553312;178553311 | chr2:179418040;179418039;179418038 |
N2A | 27295 | 82108;82109;82110 | chr2:178553313;178553312;178553311 | chr2:179418040;179418039;179418038 |
N2B | 20798 | 62617;62618;62619 | chr2:178553313;178553312;178553311 | chr2:179418040;179418039;179418038 |
Novex-1 | 20923 | 62992;62993;62994 | chr2:178553313;178553312;178553311 | chr2:179418040;179418039;179418038 |
Novex-2 | 20990 | 63193;63194;63195 | chr2:178553313;178553312;178553311 | chr2:179418040;179418039;179418038 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.998 | N | 0.805 | 0.6 | 0.746065682744 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9575 | likely_pathogenic | 0.9531 | pathogenic | -2.332 | Highly Destabilizing | 0.985 | D | 0.729 | prob.delet. | None | None | None | None | N |
F/C | 0.6744 | likely_pathogenic | 0.6507 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.492213696 | None | None | N |
F/D | 0.998 | likely_pathogenic | 0.9976 | pathogenic | -0.935 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
F/E | 0.9963 | likely_pathogenic | 0.9957 | pathogenic | -0.815 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
F/G | 0.9864 | likely_pathogenic | 0.9849 | pathogenic | -2.7 | Highly Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
F/H | 0.9521 | likely_pathogenic | 0.9502 | pathogenic | -0.979 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
F/I | 0.4391 | ambiguous | 0.4129 | ambiguous | -1.21 | Destabilizing | 0.835 | D | 0.659 | neutral | N | 0.398161114 | None | None | N |
F/K | 0.9915 | likely_pathogenic | 0.9913 | pathogenic | -1.421 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
F/L | 0.9257 | likely_pathogenic | 0.9172 | pathogenic | -1.21 | Destabilizing | 0.031 | N | 0.283 | neutral | N | 0.468775992 | None | None | N |
F/M | 0.7721 | likely_pathogenic | 0.7644 | pathogenic | -1.0 | Destabilizing | 0.991 | D | 0.734 | prob.delet. | None | None | None | None | N |
F/N | 0.9883 | likely_pathogenic | 0.9878 | pathogenic | -1.52 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
F/P | 0.9987 | likely_pathogenic | 0.9984 | pathogenic | -1.58 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
F/Q | 0.9855 | likely_pathogenic | 0.9847 | pathogenic | -1.543 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
F/R | 0.9791 | likely_pathogenic | 0.9783 | pathogenic | -0.811 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
F/S | 0.9616 | likely_pathogenic | 0.9551 | pathogenic | -2.405 | Highly Destabilizing | 0.998 | D | 0.805 | deleterious | N | 0.510393328 | None | None | N |
F/T | 0.9637 | likely_pathogenic | 0.9613 | pathogenic | -2.185 | Highly Destabilizing | 0.985 | D | 0.796 | deleterious | None | None | None | None | N |
F/V | 0.4615 | ambiguous | 0.4325 | ambiguous | -1.58 | Destabilizing | 0.835 | D | 0.686 | prob.neutral | N | 0.379913709 | None | None | N |
F/W | 0.7653 | likely_pathogenic | 0.7479 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/Y | 0.3176 | likely_benign | 0.3032 | benign | -0.578 | Destabilizing | 0.993 | D | 0.652 | neutral | N | 0.505448868 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.