Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29872 | 89839;89840;89841 | chr2:178553286;178553285;178553284 | chr2:179418013;179418012;179418011 |
N2AB | 28231 | 84916;84917;84918 | chr2:178553286;178553285;178553284 | chr2:179418013;179418012;179418011 |
N2A | 27304 | 82135;82136;82137 | chr2:178553286;178553285;178553284 | chr2:179418013;179418012;179418011 |
N2B | 20807 | 62644;62645;62646 | chr2:178553286;178553285;178553284 | chr2:179418013;179418012;179418011 |
Novex-1 | 20932 | 63019;63020;63021 | chr2:178553286;178553285;178553284 | chr2:179418013;179418012;179418011 |
Novex-2 | 20999 | 63220;63221;63222 | chr2:178553286;178553285;178553284 | chr2:179418013;179418012;179418011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.497 | N | 0.611 | 0.231 | 0.280987212366 | gnomAD-4.0.0 | 6.8614E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99467E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1257 | likely_benign | 0.1249 | benign | -0.936 | Destabilizing | 0.055 | N | 0.552 | neutral | N | 0.50720408 | None | None | N |
T/C | 0.4255 | ambiguous | 0.4445 | ambiguous | -0.644 | Destabilizing | 0.968 | D | 0.619 | neutral | None | None | None | None | N |
T/D | 0.6102 | likely_pathogenic | 0.5898 | pathogenic | -0.334 | Destabilizing | 0.726 | D | 0.634 | neutral | None | None | None | None | N |
T/E | 0.4361 | ambiguous | 0.4308 | ambiguous | -0.292 | Destabilizing | 0.726 | D | 0.615 | neutral | None | None | None | None | N |
T/F | 0.2368 | likely_benign | 0.2477 | benign | -0.865 | Destabilizing | 0.567 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/G | 0.4138 | ambiguous | 0.4013 | ambiguous | -1.238 | Destabilizing | 0.567 | D | 0.67 | neutral | None | None | None | None | N |
T/H | 0.2649 | likely_benign | 0.2848 | benign | -1.433 | Destabilizing | 0.968 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/I | 0.1365 | likely_benign | 0.1418 | benign | -0.211 | Destabilizing | 0.001 | N | 0.403 | neutral | N | 0.500344452 | None | None | N |
T/K | 0.2655 | likely_benign | 0.2779 | benign | -0.757 | Destabilizing | 0.497 | N | 0.611 | neutral | N | 0.506526304 | None | None | N |
T/L | 0.1094 | likely_benign | 0.1127 | benign | -0.211 | Destabilizing | 0.026 | N | 0.513 | neutral | None | None | None | None | N |
T/M | 0.1043 | likely_benign | 0.1048 | benign | -0.035 | Destabilizing | 0.026 | N | 0.491 | neutral | None | None | None | None | N |
T/N | 0.1741 | likely_benign | 0.1711 | benign | -0.835 | Destabilizing | 0.726 | D | 0.555 | neutral | None | None | None | None | N |
T/P | 0.8277 | likely_pathogenic | 0.7621 | pathogenic | -0.42 | Destabilizing | 0.859 | D | 0.64 | neutral | D | 0.552428718 | None | None | N |
T/Q | 0.2519 | likely_benign | 0.2661 | benign | -0.921 | Destabilizing | 0.567 | D | 0.641 | neutral | None | None | None | None | N |
T/R | 0.2246 | likely_benign | 0.2382 | benign | -0.582 | Destabilizing | 0.497 | N | 0.637 | neutral | D | 0.524901421 | None | None | N |
T/S | 0.1299 | likely_benign | 0.1326 | benign | -1.136 | Destabilizing | 0.22 | N | 0.549 | neutral | N | 0.483916016 | None | None | N |
T/V | 0.1279 | likely_benign | 0.1356 | benign | -0.42 | Destabilizing | 0.001 | N | 0.254 | neutral | None | None | None | None | N |
T/W | 0.6314 | likely_pathogenic | 0.6317 | pathogenic | -0.801 | Destabilizing | 0.968 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/Y | 0.2942 | likely_benign | 0.3179 | benign | -0.559 | Destabilizing | 0.726 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.