Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29878 | 89857;89858;89859 | chr2:178553268;178553267;178553266 | chr2:179417995;179417994;179417993 |
N2AB | 28237 | 84934;84935;84936 | chr2:178553268;178553267;178553266 | chr2:179417995;179417994;179417993 |
N2A | 27310 | 82153;82154;82155 | chr2:178553268;178553267;178553266 | chr2:179417995;179417994;179417993 |
N2B | 20813 | 62662;62663;62664 | chr2:178553268;178553267;178553266 | chr2:179417995;179417994;179417993 |
Novex-1 | 20938 | 63037;63038;63039 | chr2:178553268;178553267;178553266 | chr2:179417995;179417994;179417993 |
Novex-2 | 21005 | 63238;63239;63240 | chr2:178553268;178553267;178553266 | chr2:179417995;179417994;179417993 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.989 | N | 0.515 | 0.331 | 0.367612772649 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
K/N | rs748356210 | None | 0.998 | N | 0.537 | 0.357 | 0.335910606209 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3059 | likely_benign | 0.2903 | benign | -0.465 | Destabilizing | 0.996 | D | 0.535 | neutral | None | None | None | None | N |
K/C | 0.6274 | likely_pathogenic | 0.5822 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
K/D | 0.4644 | ambiguous | 0.4333 | ambiguous | -0.102 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
K/E | 0.1471 | likely_benign | 0.134 | benign | -0.008 | Destabilizing | 0.989 | D | 0.515 | neutral | N | 0.421600908 | None | None | N |
K/F | 0.6945 | likely_pathogenic | 0.6438 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
K/G | 0.3791 | ambiguous | 0.3614 | ambiguous | -0.819 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | N |
K/H | 0.2717 | likely_benign | 0.2606 | benign | -1.259 | Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
K/I | 0.2504 | likely_benign | 0.2262 | benign | 0.441 | Stabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
K/L | 0.3113 | likely_benign | 0.2839 | benign | 0.441 | Stabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | N |
K/M | 0.1892 | likely_benign | 0.1717 | benign | 0.356 | Stabilizing | 1.0 | D | 0.559 | neutral | N | 0.468280134 | None | None | N |
K/N | 0.2837 | likely_benign | 0.2605 | benign | -0.335 | Destabilizing | 0.998 | D | 0.537 | neutral | N | 0.445056557 | None | None | N |
K/P | 0.8702 | likely_pathogenic | 0.8467 | pathogenic | 0.17 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
K/Q | 0.1105 | likely_benign | 0.109 | benign | -0.417 | Destabilizing | 0.997 | D | 0.543 | neutral | N | 0.436781004 | None | None | N |
K/R | 0.0834 | likely_benign | 0.0811 | benign | -0.603 | Destabilizing | 0.217 | N | 0.299 | neutral | N | 0.430703181 | None | None | N |
K/S | 0.3449 | ambiguous | 0.3169 | benign | -0.952 | Destabilizing | 0.996 | D | 0.516 | neutral | None | None | None | None | N |
K/T | 0.1465 | likely_benign | 0.1367 | benign | -0.655 | Destabilizing | 0.998 | D | 0.527 | neutral | N | 0.446499352 | None | None | N |
K/V | 0.2381 | likely_benign | 0.2182 | benign | 0.17 | Stabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
K/W | 0.7195 | likely_pathogenic | 0.6815 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/Y | 0.5273 | ambiguous | 0.4865 | ambiguous | 0.152 | Stabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.