Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29889 | 89890;89891;89892 | chr2:178553235;178553234;178553233 | chr2:179417962;179417961;179417960 |
N2AB | 28248 | 84967;84968;84969 | chr2:178553235;178553234;178553233 | chr2:179417962;179417961;179417960 |
N2A | 27321 | 82186;82187;82188 | chr2:178553235;178553234;178553233 | chr2:179417962;179417961;179417960 |
N2B | 20824 | 62695;62696;62697 | chr2:178553235;178553234;178553233 | chr2:179417962;179417961;179417960 |
Novex-1 | 20949 | 63070;63071;63072 | chr2:178553235;178553234;178553233 | chr2:179417962;179417961;179417960 |
Novex-2 | 21016 | 63271;63272;63273 | chr2:178553235;178553234;178553233 | chr2:179417962;179417961;179417960 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1293413587 | -0.326 | 0.003 | N | 0.179 | 0.047 | 0.248417906384 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 1.11346E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1293413587 | -0.326 | 0.003 | N | 0.179 | 0.047 | 0.248417906384 | gnomAD-4.0.0 | 5.47479E-06 | None | None | None | None | N | None | 0 | 4.47227E-05 | None | 0 | 1.51156E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1356821044 | 0.535 | 0.003 | N | 0.175 | 0.113 | 0.250039746154 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1356821044 | 0.535 | 0.003 | N | 0.175 | 0.113 | 0.250039746154 | gnomAD-4.0.0 | 2.0531E-06 | None | None | None | None | N | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1683 | likely_benign | 0.147 | benign | -0.352 | Destabilizing | 0.001 | N | 0.263 | neutral | N | 0.485541426 | None | None | N |
E/C | 0.7117 | likely_pathogenic | 0.6713 | pathogenic | 0.037 | Stabilizing | 0.497 | N | 0.384 | neutral | None | None | None | None | N |
E/D | 0.1555 | likely_benign | 0.1422 | benign | -0.274 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.462620811 | None | None | N |
E/F | 0.6434 | likely_pathogenic | 0.5829 | pathogenic | -0.244 | Destabilizing | 0.022 | N | 0.505 | neutral | None | None | None | None | N |
E/G | 0.205 | likely_benign | 0.1714 | benign | -0.539 | Destabilizing | 0.006 | N | 0.306 | neutral | N | 0.494557554 | None | None | N |
E/H | 0.2246 | likely_benign | 0.206 | benign | -0.011 | Destabilizing | None | N | 0.093 | neutral | None | None | None | None | N |
E/I | 0.2382 | likely_benign | 0.2089 | benign | 0.104 | Stabilizing | 0.009 | N | 0.447 | neutral | None | None | None | None | N |
E/K | 0.0931 | likely_benign | 0.0889 | benign | 0.494 | Stabilizing | 0.003 | N | 0.175 | neutral | N | 0.498040106 | None | None | N |
E/L | 0.2703 | likely_benign | 0.2319 | benign | 0.104 | Stabilizing | None | N | 0.243 | neutral | None | None | None | None | N |
E/M | 0.3576 | ambiguous | 0.317 | benign | 0.203 | Stabilizing | 0.138 | N | 0.428 | neutral | None | None | None | None | N |
E/N | 0.2045 | likely_benign | 0.1821 | benign | 0.108 | Stabilizing | None | N | 0.096 | neutral | None | None | None | None | N |
E/P | 0.87 | likely_pathogenic | 0.796 | pathogenic | -0.028 | Destabilizing | 0.037 | N | 0.391 | neutral | None | None | None | None | N |
E/Q | 0.0686 | likely_benign | 0.0683 | benign | 0.148 | Stabilizing | None | N | 0.097 | neutral | N | 0.483161569 | None | None | N |
E/R | 0.1323 | likely_benign | 0.1222 | benign | 0.637 | Stabilizing | None | N | 0.115 | neutral | None | None | None | None | N |
E/S | 0.1727 | likely_benign | 0.1619 | benign | -0.024 | Destabilizing | 0.001 | N | 0.12 | neutral | None | None | None | None | N |
E/T | 0.1483 | likely_benign | 0.1383 | benign | 0.137 | Stabilizing | None | N | 0.147 | neutral | None | None | None | None | N |
E/V | 0.176 | likely_benign | 0.1513 | benign | -0.028 | Destabilizing | 0.007 | N | 0.328 | neutral | D | 0.522669192 | None | None | N |
E/W | 0.7652 | likely_pathogenic | 0.6978 | pathogenic | -0.092 | Destabilizing | 0.788 | D | 0.371 | neutral | None | None | None | None | N |
E/Y | 0.4795 | ambiguous | 0.411 | ambiguous | 0.006 | Stabilizing | 0.044 | N | 0.479 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.