Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29890 | 89893;89894;89895 | chr2:178553232;178553231;178553230 | chr2:179417959;179417958;179417957 |
N2AB | 28249 | 84970;84971;84972 | chr2:178553232;178553231;178553230 | chr2:179417959;179417958;179417957 |
N2A | 27322 | 82189;82190;82191 | chr2:178553232;178553231;178553230 | chr2:179417959;179417958;179417957 |
N2B | 20825 | 62698;62699;62700 | chr2:178553232;178553231;178553230 | chr2:179417959;179417958;179417957 |
Novex-1 | 20950 | 63073;63074;63075 | chr2:178553232;178553231;178553230 | chr2:179417959;179417958;179417957 |
Novex-2 | 21017 | 63274;63275;63276 | chr2:178553232;178553231;178553230 | chr2:179417959;179417958;179417957 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.98 | N | 0.619 | 0.31 | 0.416328079214 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.36 | ambiguous | 0.3419 | ambiguous | -0.536 | Destabilizing | 0.971 | D | 0.661 | neutral | None | None | None | None | N |
N/C | 0.3459 | ambiguous | 0.3519 | ambiguous | 0.258 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
N/D | 0.2647 | likely_benign | 0.2312 | benign | 0.029 | Stabilizing | 0.98 | D | 0.619 | neutral | N | 0.499234972 | None | None | N |
N/E | 0.5332 | ambiguous | 0.4876 | ambiguous | 0.018 | Stabilizing | 0.985 | D | 0.628 | neutral | None | None | None | None | N |
N/F | 0.6714 | likely_pathogenic | 0.6395 | pathogenic | -0.773 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
N/G | 0.471 | ambiguous | 0.445 | ambiguous | -0.75 | Destabilizing | 0.985 | D | 0.585 | neutral | None | None | None | None | N |
N/H | 0.1715 | likely_benign | 0.157 | benign | -0.751 | Destabilizing | 0.999 | D | 0.669 | neutral | D | 0.533251545 | None | None | N |
N/I | 0.2355 | likely_benign | 0.216 | benign | -0.051 | Destabilizing | 0.994 | D | 0.785 | deleterious | D | 0.526978934 | None | None | N |
N/K | 0.4326 | ambiguous | 0.395 | ambiguous | 0.048 | Stabilizing | 0.98 | D | 0.631 | neutral | N | 0.502061847 | None | None | N |
N/L | 0.3277 | likely_benign | 0.3142 | benign | -0.051 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/M | 0.3355 | likely_benign | 0.3252 | benign | 0.39 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
N/P | 0.7799 | likely_pathogenic | 0.7504 | pathogenic | -0.185 | Destabilizing | 0.998 | D | 0.772 | deleterious | None | None | None | None | N |
N/Q | 0.4425 | ambiguous | 0.4227 | ambiguous | -0.517 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
N/R | 0.5209 | ambiguous | 0.4907 | ambiguous | 0.082 | Stabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
N/S | 0.1298 | likely_benign | 0.1275 | benign | -0.315 | Destabilizing | 0.659 | D | 0.357 | neutral | N | 0.449787587 | None | None | N |
N/T | 0.1253 | likely_benign | 0.1228 | benign | -0.164 | Destabilizing | 0.4 | N | 0.363 | neutral | N | 0.429124313 | None | None | N |
N/V | 0.2448 | likely_benign | 0.2308 | benign | -0.185 | Destabilizing | 0.996 | D | 0.742 | deleterious | None | None | None | None | N |
N/W | 0.8602 | likely_pathogenic | 0.8377 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/Y | 0.2146 | likely_benign | 0.1942 | benign | -0.421 | Destabilizing | 0.999 | D | 0.766 | deleterious | D | 0.524938706 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.