Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29905 | 89938;89939;89940 | chr2:178553187;178553186;178553185 | chr2:179417914;179417913;179417912 |
N2AB | 28264 | 85015;85016;85017 | chr2:178553187;178553186;178553185 | chr2:179417914;179417913;179417912 |
N2A | 27337 | 82234;82235;82236 | chr2:178553187;178553186;178553185 | chr2:179417914;179417913;179417912 |
N2B | 20840 | 62743;62744;62745 | chr2:178553187;178553186;178553185 | chr2:179417914;179417913;179417912 |
Novex-1 | 20965 | 63118;63119;63120 | chr2:178553187;178553186;178553185 | chr2:179417914;179417913;179417912 |
Novex-2 | 21032 | 63319;63320;63321 | chr2:178553187;178553186;178553185 | chr2:179417914;179417913;179417912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs773727575 | 0.386 | 0.052 | N | 0.268 | 0.116 | 0.0762999501168 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs773727575 | 0.386 | 0.052 | N | 0.268 | 0.116 | 0.0762999501168 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs773727575 | 0.386 | 0.052 | N | 0.268 | 0.116 | 0.0762999501168 | gnomAD-4.0.0 | 5.12376E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39273E-06 | 4.02015E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1567 | likely_benign | 0.1391 | benign | -0.23 | Destabilizing | 0.149 | N | 0.323 | neutral | None | None | None | None | N |
N/C | 0.249 | likely_benign | 0.2311 | benign | 0.425 | Stabilizing | 0.935 | D | 0.393 | neutral | None | None | None | None | N |
N/D | 0.0952 | likely_benign | 0.0832 | benign | 0.033 | Stabilizing | None | N | 0.1 | neutral | N | 0.393773148 | None | None | N |
N/E | 0.2137 | likely_benign | 0.1747 | benign | -0.027 | Destabilizing | 0.002 | N | 0.122 | neutral | None | None | None | None | N |
N/F | 0.3518 | ambiguous | 0.3159 | benign | -0.749 | Destabilizing | 0.38 | N | 0.373 | neutral | None | None | None | None | N |
N/G | 0.2242 | likely_benign | 0.2016 | benign | -0.353 | Destabilizing | 0.067 | N | 0.235 | neutral | None | None | None | None | N |
N/H | 0.0832 | likely_benign | 0.078 | benign | -0.45 | Destabilizing | 0.001 | N | 0.197 | neutral | N | 0.480162769 | None | None | N |
N/I | 0.1791 | likely_benign | 0.1672 | benign | 0.001 | Stabilizing | 0.484 | N | 0.387 | neutral | N | 0.502596911 | None | None | N |
N/K | 0.1883 | likely_benign | 0.1646 | benign | 0.188 | Stabilizing | 0.117 | N | 0.203 | neutral | N | 0.448954428 | None | None | N |
N/L | 0.17 | likely_benign | 0.1471 | benign | 0.001 | Stabilizing | 0.149 | N | 0.355 | neutral | None | None | None | None | N |
N/M | 0.2425 | likely_benign | 0.217 | benign | 0.387 | Stabilizing | 0.935 | D | 0.347 | neutral | None | None | None | None | N |
N/P | 0.7445 | likely_pathogenic | 0.6982 | pathogenic | -0.052 | Destabilizing | 0.555 | D | 0.356 | neutral | None | None | None | None | N |
N/Q | 0.2003 | likely_benign | 0.1736 | benign | -0.22 | Destabilizing | 0.149 | N | 0.289 | neutral | None | None | None | None | N |
N/R | 0.2294 | likely_benign | 0.1938 | benign | 0.268 | Stabilizing | 0.149 | N | 0.29 | neutral | None | None | None | None | N |
N/S | 0.0791 | likely_benign | 0.0761 | benign | 0.049 | Stabilizing | 0.052 | N | 0.268 | neutral | N | 0.420399602 | None | None | N |
N/T | 0.1093 | likely_benign | 0.1043 | benign | 0.111 | Stabilizing | 0.117 | N | 0.209 | neutral | N | 0.451282657 | None | None | N |
N/V | 0.1897 | likely_benign | 0.1683 | benign | -0.052 | Destabilizing | 0.555 | D | 0.347 | neutral | None | None | None | None | N |
N/W | 0.5693 | likely_pathogenic | 0.5079 | ambiguous | -0.803 | Destabilizing | 0.935 | D | 0.498 | neutral | None | None | None | None | N |
N/Y | 0.1076 | likely_benign | 0.0999 | benign | -0.509 | Destabilizing | 0.188 | N | 0.371 | neutral | N | 0.431486175 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.