Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29912 | 89959;89960;89961 | chr2:178553166;178553165;178553164 | chr2:179417893;179417892;179417891 |
N2AB | 28271 | 85036;85037;85038 | chr2:178553166;178553165;178553164 | chr2:179417893;179417892;179417891 |
N2A | 27344 | 82255;82256;82257 | chr2:178553166;178553165;178553164 | chr2:179417893;179417892;179417891 |
N2B | 20847 | 62764;62765;62766 | chr2:178553166;178553165;178553164 | chr2:179417893;179417892;179417891 |
Novex-1 | 20972 | 63139;63140;63141 | chr2:178553166;178553165;178553164 | chr2:179417893;179417892;179417891 |
Novex-2 | 21039 | 63340;63341;63342 | chr2:178553166;178553165;178553164 | chr2:179417893;179417892;179417891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.942 | N | 0.714 | 0.26 | 0.389904358541 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
L/P | rs748326514 | -1.683 | 0.99 | N | 0.874 | 0.65 | 0.804452295794 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 1.15996E-04 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 1.65893E-04 |
L/P | rs748326514 | -1.683 | 0.99 | N | 0.874 | 0.65 | 0.804452295794 | gnomAD-4.0.0 | 9.58034E-06 | None | None | None | None | N | None | 0 | 4.47207E-05 | None | 0 | 0 | None | 0 | 0 | 8.09648E-06 | 0 | 4.97001E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9028 | likely_pathogenic | 0.8553 | pathogenic | -2.397 | Highly Destabilizing | 0.754 | D | 0.755 | deleterious | None | None | None | None | N |
L/C | 0.7693 | likely_pathogenic | 0.7439 | pathogenic | -1.98 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9991 | pathogenic | -2.172 | Highly Destabilizing | 0.978 | D | 0.874 | deleterious | None | None | None | None | N |
L/E | 0.9971 | likely_pathogenic | 0.9932 | pathogenic | -1.953 | Destabilizing | 0.978 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.5418 | ambiguous | 0.493 | ambiguous | -1.474 | Destabilizing | 0.942 | D | 0.714 | prob.delet. | N | 0.481709634 | None | None | N |
L/G | 0.9871 | likely_pathogenic | 0.979 | pathogenic | -2.93 | Highly Destabilizing | 0.978 | D | 0.866 | deleterious | None | None | None | None | N |
L/H | 0.9861 | likely_pathogenic | 0.975 | pathogenic | -2.333 | Highly Destabilizing | 0.997 | D | 0.863 | deleterious | N | 0.505943182 | None | None | N |
L/I | 0.1547 | likely_benign | 0.1399 | benign | -0.864 | Destabilizing | 0.032 | N | 0.377 | neutral | N | 0.458824705 | None | None | N |
L/K | 0.9934 | likely_pathogenic | 0.9861 | pathogenic | -1.612 | Destabilizing | 0.956 | D | 0.853 | deleterious | None | None | None | None | N |
L/M | 0.2613 | likely_benign | 0.2055 | benign | -1.046 | Destabilizing | 0.304 | N | 0.568 | neutral | None | None | None | None | N |
L/N | 0.9959 | likely_pathogenic | 0.9916 | pathogenic | -1.901 | Destabilizing | 0.978 | D | 0.873 | deleterious | None | None | None | None | N |
L/P | 0.9962 | likely_pathogenic | 0.9931 | pathogenic | -1.355 | Destabilizing | 0.99 | D | 0.874 | deleterious | N | 0.505943182 | None | None | N |
L/Q | 0.9772 | likely_pathogenic | 0.9536 | pathogenic | -1.761 | Destabilizing | 0.978 | D | 0.867 | deleterious | None | None | None | None | N |
L/R | 0.9839 | likely_pathogenic | 0.9706 | pathogenic | -1.431 | Destabilizing | 0.942 | D | 0.857 | deleterious | N | 0.505943182 | None | None | N |
L/S | 0.9872 | likely_pathogenic | 0.9756 | pathogenic | -2.711 | Highly Destabilizing | 0.956 | D | 0.845 | deleterious | None | None | None | None | N |
L/T | 0.9545 | likely_pathogenic | 0.9214 | pathogenic | -2.336 | Highly Destabilizing | 0.956 | D | 0.792 | deleterious | None | None | None | None | N |
L/V | 0.1658 | likely_benign | 0.1382 | benign | -1.355 | Destabilizing | 0.247 | N | 0.677 | prob.neutral | N | 0.461902295 | None | None | N |
L/W | 0.9523 | likely_pathogenic | 0.9291 | pathogenic | -1.73 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
L/Y | 0.9593 | likely_pathogenic | 0.9361 | pathogenic | -1.452 | Destabilizing | 0.978 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.