Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29918 | 89977;89978;89979 | chr2:178553148;178553147;178553146 | chr2:179417875;179417874;179417873 |
N2AB | 28277 | 85054;85055;85056 | chr2:178553148;178553147;178553146 | chr2:179417875;179417874;179417873 |
N2A | 27350 | 82273;82274;82275 | chr2:178553148;178553147;178553146 | chr2:179417875;179417874;179417873 |
N2B | 20853 | 62782;62783;62784 | chr2:178553148;178553147;178553146 | chr2:179417875;179417874;179417873 |
Novex-1 | 20978 | 63157;63158;63159 | chr2:178553148;178553147;178553146 | chr2:179417875;179417874;179417873 |
Novex-2 | 21045 | 63358;63359;63360 | chr2:178553148;178553147;178553146 | chr2:179417875;179417874;179417873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs768749427 | -0.122 | 0.999 | N | 0.598 | 0.413 | 0.489658423131 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 2.32045E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs768749427 | -0.122 | 0.999 | N | 0.598 | 0.413 | 0.489658423131 | gnomAD-4.0.0 | 1.91213E-05 | None | None | None | None | I | None | 0 | 2.74461E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1825 | likely_benign | 0.1698 | benign | -0.324 | Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.396473177 | None | None | I |
V/C | 0.7399 | likely_pathogenic | 0.7167 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
V/D | 0.6922 | likely_pathogenic | 0.6432 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.535254487 | None | None | I |
V/E | 0.5655 | likely_pathogenic | 0.5327 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/F | 0.2523 | likely_benign | 0.2225 | benign | -0.719 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.490692847 | None | None | I |
V/G | 0.3758 | ambiguous | 0.348 | ambiguous | -0.385 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.510606759 | None | None | I |
V/H | 0.7757 | likely_pathogenic | 0.745 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
V/I | 0.0924 | likely_benign | 0.0881 | benign | -0.312 | Destabilizing | 0.997 | D | 0.549 | neutral | N | 0.483054798 | None | None | I |
V/K | 0.6634 | likely_pathogenic | 0.6146 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/L | 0.4101 | ambiguous | 0.3685 | ambiguous | -0.312 | Destabilizing | 0.997 | D | 0.62 | neutral | N | 0.468989423 | None | None | I |
V/M | 0.2482 | likely_benign | 0.2225 | benign | -0.466 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
V/N | 0.5026 | ambiguous | 0.4767 | ambiguous | -0.112 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
V/P | 0.8653 | likely_pathogenic | 0.8221 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
V/Q | 0.5781 | likely_pathogenic | 0.5509 | ambiguous | -0.326 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
V/R | 0.6149 | likely_pathogenic | 0.5553 | ambiguous | 0.12 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
V/S | 0.2789 | likely_benign | 0.2733 | benign | -0.429 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/T | 0.2218 | likely_benign | 0.1999 | benign | -0.457 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/W | 0.9115 | likely_pathogenic | 0.8879 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
V/Y | 0.7402 | likely_pathogenic | 0.6872 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.