Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29919 | 89980;89981;89982 | chr2:178553145;178553144;178553143 | chr2:179417872;179417871;179417870 |
N2AB | 28278 | 85057;85058;85059 | chr2:178553145;178553144;178553143 | chr2:179417872;179417871;179417870 |
N2A | 27351 | 82276;82277;82278 | chr2:178553145;178553144;178553143 | chr2:179417872;179417871;179417870 |
N2B | 20854 | 62785;62786;62787 | chr2:178553145;178553144;178553143 | chr2:179417872;179417871;179417870 |
Novex-1 | 20979 | 63160;63161;63162 | chr2:178553145;178553144;178553143 | chr2:179417872;179417871;179417870 |
Novex-2 | 21046 | 63361;63362;63363 | chr2:178553145;178553144;178553143 | chr2:179417872;179417871;179417870 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs759930753 | None | 1.0 | D | 0.872 | 0.764 | 0.562917172789 | gnomAD-4.0.0 | 4.10828E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.4008E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4382 | ambiguous | 0.4627 | ambiguous | -0.277 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.594800052 | None | None | I |
G/C | 0.6941 | likely_pathogenic | 0.6921 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.639425667 | None | None | I |
G/D | 0.7509 | likely_pathogenic | 0.726 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.605772511 | None | None | I |
G/E | 0.7937 | likely_pathogenic | 0.7858 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/F | 0.9545 | likely_pathogenic | 0.9515 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
G/H | 0.9195 | likely_pathogenic | 0.9113 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/I | 0.9072 | likely_pathogenic | 0.9042 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
G/K | 0.9066 | likely_pathogenic | 0.8987 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/L | 0.8719 | likely_pathogenic | 0.869 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
G/M | 0.9201 | likely_pathogenic | 0.918 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/N | 0.8108 | likely_pathogenic | 0.7986 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/P | 0.9866 | likely_pathogenic | 0.9839 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
G/Q | 0.8473 | likely_pathogenic | 0.8436 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
G/R | 0.8216 | likely_pathogenic | 0.8085 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.62913006 | None | None | I |
G/S | 0.3036 | likely_benign | 0.3063 | benign | -0.521 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.592569486 | None | None | I |
G/T | 0.6509 | likely_pathogenic | 0.6567 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
G/V | 0.8161 | likely_pathogenic | 0.8145 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.623002697 | None | None | I |
G/W | 0.9053 | likely_pathogenic | 0.887 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
G/Y | 0.9302 | likely_pathogenic | 0.9214 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.