Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29920 | 89983;89984;89985 | chr2:178553142;178553141;178553140 | chr2:179417869;179417868;179417867 |
N2AB | 28279 | 85060;85061;85062 | chr2:178553142;178553141;178553140 | chr2:179417869;179417868;179417867 |
N2A | 27352 | 82279;82280;82281 | chr2:178553142;178553141;178553140 | chr2:179417869;179417868;179417867 |
N2B | 20855 | 62788;62789;62790 | chr2:178553142;178553141;178553140 | chr2:179417869;179417868;179417867 |
Novex-1 | 20980 | 63163;63164;63165 | chr2:178553142;178553141;178553140 | chr2:179417869;179417868;179417867 |
Novex-2 | 21047 | 63364;63365;63366 | chr2:178553142;178553141;178553140 | chr2:179417869;179417868;179417867 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs747181293 | -0.286 | 0.052 | N | 0.349 | 0.106 | 0.186928172975 | gnomAD-2.1.1 | 8.06E-05 | None | None | None | None | I | None | 0 | 4.35111E-04 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 3.33E-04 |
E/D | rs747181293 | -0.286 | 0.052 | N | 0.349 | 0.106 | 0.186928172975 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | I | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 8.82E-05 | 0 | 4.77555E-04 |
E/D | rs747181293 | -0.286 | 0.052 | N | 0.349 | 0.106 | 0.186928172975 | gnomAD-4.0.0 | 4.09236E-05 | None | None | None | None | I | None | 0 | 3.6674E-04 | None | 0 | 0 | None | 0 | 0 | 3.30783E-05 | 0 | 8.01E-05 |
E/G | None | None | 0.117 | N | 0.477 | 0.334 | 0.358340041657 | gnomAD-4.0.0 | 1.59379E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43377E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1167 | likely_benign | 0.1301 | benign | -0.038 | Destabilizing | 0.027 | N | 0.407 | neutral | N | 0.505643656 | None | None | I |
E/C | 0.7801 | likely_pathogenic | 0.785 | pathogenic | -0.253 | Destabilizing | 0.935 | D | 0.527 | neutral | None | None | None | None | I |
E/D | 0.1279 | likely_benign | 0.1221 | benign | -0.324 | Destabilizing | 0.052 | N | 0.349 | neutral | N | 0.513975138 | None | None | I |
E/F | 0.6298 | likely_pathogenic | 0.6419 | pathogenic | -0.095 | Destabilizing | 0.791 | D | 0.487 | neutral | None | None | None | None | I |
E/G | 0.1404 | likely_benign | 0.1518 | benign | -0.144 | Destabilizing | 0.117 | N | 0.477 | neutral | N | 0.489775069 | None | None | I |
E/H | 0.3299 | likely_benign | 0.3602 | ambiguous | 0.547 | Stabilizing | 0.38 | N | 0.403 | neutral | None | None | None | None | I |
E/I | 0.2327 | likely_benign | 0.2352 | benign | 0.18 | Stabilizing | 0.555 | D | 0.491 | neutral | None | None | None | None | I |
E/K | 0.0925 | likely_benign | 0.105 | benign | 0.346 | Stabilizing | None | N | 0.247 | neutral | N | 0.49434644 | None | None | I |
E/L | 0.2384 | likely_benign | 0.2547 | benign | 0.18 | Stabilizing | 0.149 | N | 0.515 | neutral | None | None | None | None | I |
E/M | 0.3195 | likely_benign | 0.3223 | benign | -0.067 | Destabilizing | 0.824 | D | 0.481 | neutral | None | None | None | None | I |
E/N | 0.1889 | likely_benign | 0.2009 | benign | 0.143 | Stabilizing | 0.149 | N | 0.398 | neutral | None | None | None | None | I |
E/P | 0.2299 | likely_benign | 0.2714 | benign | 0.125 | Stabilizing | 0.001 | N | 0.305 | neutral | None | None | None | None | I |
E/Q | 0.0844 | likely_benign | 0.0957 | benign | 0.143 | Stabilizing | None | N | 0.22 | neutral | N | 0.486191104 | None | None | I |
E/R | 0.1868 | likely_benign | 0.2089 | benign | 0.595 | Stabilizing | 0.081 | N | 0.357 | neutral | None | None | None | None | I |
E/S | 0.1491 | likely_benign | 0.1587 | benign | -0.009 | Destabilizing | 0.081 | N | 0.34 | neutral | None | None | None | None | I |
E/T | 0.1549 | likely_benign | 0.1628 | benign | 0.085 | Stabilizing | 0.149 | N | 0.453 | neutral | None | None | None | None | I |
E/V | 0.1576 | likely_benign | 0.1573 | benign | 0.125 | Stabilizing | 0.117 | N | 0.481 | neutral | N | 0.503720859 | None | None | I |
E/W | 0.8452 | likely_pathogenic | 0.8598 | pathogenic | -0.053 | Destabilizing | 0.935 | D | 0.559 | neutral | None | None | None | None | I |
E/Y | 0.5164 | ambiguous | 0.5225 | ambiguous | 0.127 | Stabilizing | 0.555 | D | 0.484 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.