Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29925 | 89998;89999;90000 | chr2:178553127;178553126;178553125 | chr2:179417854;179417853;179417852 |
N2AB | 28284 | 85075;85076;85077 | chr2:178553127;178553126;178553125 | chr2:179417854;179417853;179417852 |
N2A | 27357 | 82294;82295;82296 | chr2:178553127;178553126;178553125 | chr2:179417854;179417853;179417852 |
N2B | 20860 | 62803;62804;62805 | chr2:178553127;178553126;178553125 | chr2:179417854;179417853;179417852 |
Novex-1 | 20985 | 63178;63179;63180 | chr2:178553127;178553126;178553125 | chr2:179417854;179417853;179417852 |
Novex-2 | 21052 | 63379;63380;63381 | chr2:178553127;178553126;178553125 | chr2:179417854;179417853;179417852 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs780250655 | -0.735 | 0.001 | N | 0.171 | 0.111 | 0.301455362545 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
T/S | rs780250655 | -0.735 | 0.001 | N | 0.171 | 0.111 | 0.301455362545 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0899 | likely_benign | 0.0814 | benign | -0.794 | Destabilizing | 0.09 | N | 0.455 | neutral | D | 0.526440216 | None | None | N |
T/C | 0.4943 | ambiguous | 0.4031 | ambiguous | -0.451 | Destabilizing | 0.944 | D | 0.565 | neutral | None | None | None | None | N |
T/D | 0.6009 | likely_pathogenic | 0.4838 | ambiguous | 0.467 | Stabilizing | 0.388 | N | 0.566 | neutral | None | None | None | None | N |
T/E | 0.4473 | ambiguous | 0.3592 | ambiguous | 0.437 | Stabilizing | 0.241 | N | 0.564 | neutral | None | None | None | None | N |
T/F | 0.2034 | likely_benign | 0.1609 | benign | -1.09 | Destabilizing | 0.002 | N | 0.374 | neutral | None | None | None | None | N |
T/G | 0.3559 | ambiguous | 0.2902 | benign | -0.985 | Destabilizing | 0.241 | N | 0.621 | neutral | None | None | None | None | N |
T/H | 0.3027 | likely_benign | 0.2421 | benign | -1.258 | Destabilizing | 0.944 | D | 0.637 | neutral | None | None | None | None | N |
T/I | 0.175 | likely_benign | 0.1514 | benign | -0.39 | Destabilizing | 0.193 | N | 0.581 | neutral | D | 0.535022414 | None | None | N |
T/K | 0.3891 | ambiguous | 0.3075 | benign | -0.383 | Destabilizing | 0.241 | N | 0.571 | neutral | None | None | None | None | N |
T/L | 0.1313 | likely_benign | 0.1077 | benign | -0.39 | Destabilizing | 0.116 | N | 0.523 | neutral | None | None | None | None | N |
T/M | 0.1002 | likely_benign | 0.0917 | benign | -0.119 | Destabilizing | 0.818 | D | 0.583 | neutral | None | None | None | None | N |
T/N | 0.1841 | likely_benign | 0.1477 | benign | -0.246 | Destabilizing | 0.193 | N | 0.539 | neutral | N | 0.501640559 | None | None | N |
T/P | 0.1971 | likely_benign | 0.1866 | benign | -0.494 | Destabilizing | 0.773 | D | 0.625 | neutral | N | 0.490140236 | None | None | N |
T/Q | 0.3181 | likely_benign | 0.2627 | benign | -0.442 | Destabilizing | 0.69 | D | 0.611 | neutral | None | None | None | None | N |
T/R | 0.3081 | likely_benign | 0.2317 | benign | -0.199 | Destabilizing | 0.69 | D | 0.622 | neutral | None | None | None | None | N |
T/S | 0.1266 | likely_benign | 0.1095 | benign | -0.619 | Destabilizing | 0.001 | N | 0.171 | neutral | N | 0.456366842 | None | None | N |
T/V | 0.125 | likely_benign | 0.1111 | benign | -0.494 | Destabilizing | 0.388 | N | 0.498 | neutral | None | None | None | None | N |
T/W | 0.5808 | likely_pathogenic | 0.4968 | ambiguous | -0.975 | Destabilizing | 0.981 | D | 0.632 | neutral | None | None | None | None | N |
T/Y | 0.2623 | likely_benign | 0.2066 | benign | -0.73 | Destabilizing | 0.527 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.