Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29926 | 90001;90002;90003 | chr2:178553124;178553123;178553122 | chr2:179417851;179417850;179417849 |
N2AB | 28285 | 85078;85079;85080 | chr2:178553124;178553123;178553122 | chr2:179417851;179417850;179417849 |
N2A | 27358 | 82297;82298;82299 | chr2:178553124;178553123;178553122 | chr2:179417851;179417850;179417849 |
N2B | 20861 | 62806;62807;62808 | chr2:178553124;178553123;178553122 | chr2:179417851;179417850;179417849 |
Novex-1 | 20986 | 63181;63182;63183 | chr2:178553124;178553123;178553122 | chr2:179417851;179417850;179417849 |
Novex-2 | 21053 | 63382;63383;63384 | chr2:178553124;178553123;178553122 | chr2:179417851;179417850;179417849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1553541468 | None | 1.0 | N | 0.693 | 0.484 | 0.605930529564 | gnomAD-4.0.0 | 1.59624E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87054E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7123 | likely_pathogenic | 0.6234 | pathogenic | -1.754 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.507774311 | None | None | N |
V/C | 0.9139 | likely_pathogenic | 0.8804 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/D | 0.9937 | likely_pathogenic | 0.988 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/E | 0.9814 | likely_pathogenic | 0.9665 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.540137814 | None | None | N |
V/F | 0.4689 | ambiguous | 0.3915 | ambiguous | -0.977 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/G | 0.8899 | likely_pathogenic | 0.8356 | pathogenic | -2.315 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.495535514 | None | None | N |
V/H | 0.9872 | likely_pathogenic | 0.9763 | pathogenic | -2.006 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/I | 0.093 | likely_benign | 0.0912 | benign | -0.192 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
V/K | 0.9787 | likely_pathogenic | 0.9637 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/L | 0.4414 | ambiguous | 0.3923 | ambiguous | -0.192 | Destabilizing | 0.997 | D | 0.611 | neutral | N | 0.486008725 | None | None | N |
V/M | 0.4635 | ambiguous | 0.3946 | ambiguous | -0.551 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.507536929 | None | None | N |
V/N | 0.9759 | likely_pathogenic | 0.9602 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/P | 0.9892 | likely_pathogenic | 0.9825 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/Q | 0.972 | likely_pathogenic | 0.95 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/R | 0.9628 | likely_pathogenic | 0.9375 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/S | 0.9216 | likely_pathogenic | 0.878 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/T | 0.8045 | likely_pathogenic | 0.734 | pathogenic | -1.906 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
V/W | 0.9832 | likely_pathogenic | 0.9691 | pathogenic | -1.288 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9314 | likely_pathogenic | 0.8855 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.