Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29928 | 90007;90008;90009 | chr2:178553118;178553117;178553116 | chr2:179417845;179417844;179417843 |
N2AB | 28287 | 85084;85085;85086 | chr2:178553118;178553117;178553116 | chr2:179417845;179417844;179417843 |
N2A | 27360 | 82303;82304;82305 | chr2:178553118;178553117;178553116 | chr2:179417845;179417844;179417843 |
N2B | 20863 | 62812;62813;62814 | chr2:178553118;178553117;178553116 | chr2:179417845;179417844;179417843 |
Novex-1 | 20988 | 63187;63188;63189 | chr2:178553118;178553117;178553116 | chr2:179417845;179417844;179417843 |
Novex-2 | 21055 | 63388;63389;63390 | chr2:178553118;178553117;178553116 | chr2:179417845;179417844;179417843 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs746336106 | -0.466 | 0.948 | N | 0.573 | 0.144 | 0.468504517574 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9362 | likely_pathogenic | 0.9161 | pathogenic | -2.032 | Highly Destabilizing | 0.994 | D | 0.644 | neutral | D | 0.529699885 | None | None | N |
V/C | 0.9646 | likely_pathogenic | 0.9524 | pathogenic | -1.882 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/D | 0.9985 | likely_pathogenic | 0.9978 | pathogenic | -2.03 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.530206865 | None | None | N |
V/E | 0.9939 | likely_pathogenic | 0.9912 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/F | 0.4577 | ambiguous | 0.4178 | ambiguous | -1.294 | Destabilizing | 0.997 | D | 0.781 | deleterious | N | 0.502441371 | None | None | N |
V/G | 0.9675 | likely_pathogenic | 0.9575 | pathogenic | -2.546 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | N | 0.518850559 | None | None | N |
V/H | 0.9961 | likely_pathogenic | 0.9944 | pathogenic | -2.14 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
V/I | 0.0726 | likely_benign | 0.0706 | benign | -0.626 | Destabilizing | 0.948 | D | 0.573 | neutral | N | 0.454783969 | None | None | N |
V/K | 0.9926 | likely_pathogenic | 0.9893 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/L | 0.3501 | ambiguous | 0.2873 | benign | -0.626 | Destabilizing | 0.104 | N | 0.326 | neutral | N | 0.434971118 | None | None | N |
V/M | 0.4414 | ambiguous | 0.3964 | ambiguous | -0.791 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/N | 0.9936 | likely_pathogenic | 0.9909 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/P | 0.9965 | likely_pathogenic | 0.9943 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.9899 | likely_pathogenic | 0.9854 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/R | 0.9862 | likely_pathogenic | 0.9813 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/S | 0.9848 | likely_pathogenic | 0.9793 | pathogenic | -2.615 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/T | 0.9455 | likely_pathogenic | 0.928 | pathogenic | -2.276 | Highly Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
V/W | 0.9871 | likely_pathogenic | 0.9823 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/Y | 0.9663 | likely_pathogenic | 0.9532 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.