Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29933 | 90022;90023;90024 | chr2:178553103;178553102;178553101 | chr2:179417830;179417829;179417828 |
N2AB | 28292 | 85099;85100;85101 | chr2:178553103;178553102;178553101 | chr2:179417830;179417829;179417828 |
N2A | 27365 | 82318;82319;82320 | chr2:178553103;178553102;178553101 | chr2:179417830;179417829;179417828 |
N2B | 20868 | 62827;62828;62829 | chr2:178553103;178553102;178553101 | chr2:179417830;179417829;179417828 |
Novex-1 | 20993 | 63202;63203;63204 | chr2:178553103;178553102;178553101 | chr2:179417830;179417829;179417828 |
Novex-2 | 21060 | 63403;63404;63405 | chr2:178553103;178553102;178553101 | chr2:179417830;179417829;179417828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | N | 0.58 | 0.263 | 0.312306559268 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/P | rs767264453 | -0.526 | 0.997 | N | 0.576 | 0.305 | 0.298745278005 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 8.92E-06 | 0 |
T/P | rs767264453 | -0.526 | 0.997 | N | 0.576 | 0.305 | 0.298745278005 | gnomAD-4.0.0 | 1.59828E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87533E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1752 | likely_benign | 0.1686 | benign | -0.677 | Destabilizing | 0.894 | D | 0.359 | neutral | N | 0.471540499 | None | None | I |
T/C | 0.6965 | likely_pathogenic | 0.6718 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.573 | neutral | None | None | None | None | I |
T/D | 0.8737 | likely_pathogenic | 0.8319 | pathogenic | -0.081 | Destabilizing | 0.995 | D | 0.577 | neutral | None | None | None | None | I |
T/E | 0.7151 | likely_pathogenic | 0.6731 | pathogenic | -0.15 | Destabilizing | 0.995 | D | 0.572 | neutral | None | None | None | None | I |
T/F | 0.6432 | likely_pathogenic | 0.5976 | pathogenic | -1.102 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
T/G | 0.5586 | ambiguous | 0.5137 | ambiguous | -0.825 | Destabilizing | 0.982 | D | 0.549 | neutral | None | None | None | None | I |
T/H | 0.5705 | likely_pathogenic | 0.5079 | ambiguous | -1.177 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/I | 0.4089 | ambiguous | 0.4074 | ambiguous | -0.393 | Destabilizing | 0.997 | D | 0.58 | neutral | N | 0.470599136 | None | None | I |
T/K | 0.3831 | ambiguous | 0.3733 | ambiguous | -0.498 | Destabilizing | 0.993 | D | 0.569 | neutral | N | 0.42486406 | None | None | I |
T/L | 0.2812 | likely_benign | 0.2541 | benign | -0.393 | Destabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | I |
T/M | 0.1811 | likely_benign | 0.1728 | benign | 0.037 | Stabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | I |
T/N | 0.3725 | ambiguous | 0.3327 | benign | -0.284 | Destabilizing | 0.995 | D | 0.581 | neutral | None | None | None | None | I |
T/P | 0.3287 | likely_benign | 0.3345 | benign | -0.459 | Destabilizing | 0.997 | D | 0.576 | neutral | N | 0.47171107 | None | None | I |
T/Q | 0.4669 | ambiguous | 0.438 | ambiguous | -0.609 | Destabilizing | 0.997 | D | 0.534 | neutral | None | None | None | None | I |
T/R | 0.3877 | ambiguous | 0.3665 | ambiguous | -0.169 | Destabilizing | 0.997 | D | 0.585 | neutral | N | 0.439390795 | None | None | I |
T/S | 0.1682 | likely_benign | 0.144 | benign | -0.541 | Destabilizing | 0.615 | D | 0.129 | neutral | N | 0.459632781 | None | None | I |
T/V | 0.2832 | likely_benign | 0.2793 | benign | -0.459 | Destabilizing | 0.991 | D | 0.588 | neutral | None | None | None | None | I |
T/W | 0.925 | likely_pathogenic | 0.9043 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.695 | prob.delet. | None | None | None | None | I |
T/Y | 0.6313 | likely_pathogenic | 0.5857 | pathogenic | -0.764 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.