Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29935 | 90028;90029;90030 | chr2:178553097;178553096;178553095 | chr2:179417824;179417823;179417822 |
N2AB | 28294 | 85105;85106;85107 | chr2:178553097;178553096;178553095 | chr2:179417824;179417823;179417822 |
N2A | 27367 | 82324;82325;82326 | chr2:178553097;178553096;178553095 | chr2:179417824;179417823;179417822 |
N2B | 20870 | 62833;62834;62835 | chr2:178553097;178553096;178553095 | chr2:179417824;179417823;179417822 |
Novex-1 | 20995 | 63208;63209;63210 | chr2:178553097;178553096;178553095 | chr2:179417824;179417823;179417822 |
Novex-2 | 21062 | 63409;63410;63411 | chr2:178553097;178553096;178553095 | chr2:179417824;179417823;179417822 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs1247896491 | -2.014 | 0.896 | N | 0.625 | 0.275 | 0.346544149963 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
A/D | rs1247896491 | -2.014 | 0.896 | N | 0.625 | 0.275 | 0.346544149963 | gnomAD-4.0.0 | 1.59765E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8731E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6602 | likely_pathogenic | 0.6537 | pathogenic | -1.142 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
A/D | 0.4927 | ambiguous | 0.5227 | ambiguous | -1.703 | Destabilizing | 0.896 | D | 0.625 | neutral | N | 0.432414468 | None | None | N |
A/E | 0.5476 | ambiguous | 0.565 | pathogenic | -1.778 | Destabilizing | 0.919 | D | 0.635 | neutral | None | None | None | None | N |
A/F | 0.6414 | likely_pathogenic | 0.6379 | pathogenic | -1.295 | Destabilizing | 0.996 | D | 0.674 | neutral | None | None | None | None | N |
A/G | 0.1188 | likely_benign | 0.116 | benign | -1.145 | Destabilizing | 0.026 | N | 0.259 | neutral | N | 0.302370071 | None | None | N |
A/H | 0.7287 | likely_pathogenic | 0.7259 | pathogenic | -1.152 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
A/I | 0.7104 | likely_pathogenic | 0.7138 | pathogenic | -0.621 | Destabilizing | 0.988 | D | 0.678 | prob.neutral | None | None | None | None | N |
A/K | 0.822 | likely_pathogenic | 0.8241 | pathogenic | -1.131 | Destabilizing | 0.919 | D | 0.637 | neutral | None | None | None | None | N |
A/L | 0.3596 | ambiguous | 0.3824 | ambiguous | -0.621 | Destabilizing | 0.919 | D | 0.633 | neutral | None | None | None | None | N |
A/M | 0.4451 | ambiguous | 0.4503 | ambiguous | -0.528 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
A/N | 0.5028 | ambiguous | 0.5185 | ambiguous | -0.922 | Destabilizing | 0.976 | D | 0.635 | neutral | None | None | None | None | N |
A/P | 0.866 | likely_pathogenic | 0.8774 | pathogenic | -0.698 | Destabilizing | 0.984 | D | 0.67 | neutral | N | 0.51451299 | None | None | N |
A/Q | 0.6002 | likely_pathogenic | 0.6044 | pathogenic | -1.224 | Destabilizing | 0.988 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/R | 0.758 | likely_pathogenic | 0.7625 | pathogenic | -0.676 | Destabilizing | 0.976 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/S | 0.087 | likely_benign | 0.0889 | benign | -1.172 | Destabilizing | 0.046 | N | 0.26 | neutral | N | 0.366688122 | None | None | N |
A/T | 0.1843 | likely_benign | 0.1902 | benign | -1.174 | Destabilizing | 0.811 | D | 0.603 | neutral | N | 0.484979517 | None | None | N |
A/V | 0.4004 | ambiguous | 0.4078 | ambiguous | -0.698 | Destabilizing | 0.896 | D | 0.649 | neutral | N | 0.515379782 | None | None | N |
A/W | 0.9186 | likely_pathogenic | 0.9191 | pathogenic | -1.507 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/Y | 0.7394 | likely_pathogenic | 0.7303 | pathogenic | -1.138 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.