Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29945 | 90058;90059;90060 | chr2:178553067;178553066;178553065 | chr2:179417794;179417793;179417792 |
N2AB | 28304 | 85135;85136;85137 | chr2:178553067;178553066;178553065 | chr2:179417794;179417793;179417792 |
N2A | 27377 | 82354;82355;82356 | chr2:178553067;178553066;178553065 | chr2:179417794;179417793;179417792 |
N2B | 20880 | 62863;62864;62865 | chr2:178553067;178553066;178553065 | chr2:179417794;179417793;179417792 |
Novex-1 | 21005 | 63238;63239;63240 | chr2:178553067;178553066;178553065 | chr2:179417794;179417793;179417792 |
Novex-2 | 21072 | 63439;63440;63441 | chr2:178553067;178553066;178553065 | chr2:179417794;179417793;179417792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1311015897 | None | 0.898 | D | 0.368 | 0.243 | 0.641179492024 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
V/L | rs1311015897 | None | 0.898 | D | 0.368 | 0.243 | 0.641179492024 | gnomAD-4.0.0 | 1.24072E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69647E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3526 | ambiguous | 0.3512 | ambiguous | -1.169 | Destabilizing | 0.977 | D | 0.48 | neutral | N | 0.478867657 | None | None | N |
V/C | 0.7628 | likely_pathogenic | 0.7714 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
V/D | 0.8015 | likely_pathogenic | 0.8313 | pathogenic | -0.78 | Destabilizing | 0.999 | D | 0.835 | deleterious | N | 0.516330388 | None | None | N |
V/E | 0.6677 | likely_pathogenic | 0.7013 | pathogenic | -0.819 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/F | 0.3408 | ambiguous | 0.3465 | ambiguous | -1.197 | Destabilizing | 0.993 | D | 0.79 | deleterious | N | 0.490112285 | None | None | N |
V/G | 0.4717 | ambiguous | 0.4909 | ambiguous | -1.413 | Destabilizing | 0.999 | D | 0.811 | deleterious | N | 0.517344346 | None | None | N |
V/H | 0.8333 | likely_pathogenic | 0.8454 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/I | 0.0717 | likely_benign | 0.0715 | benign | -0.623 | Destabilizing | 0.117 | N | 0.249 | neutral | N | 0.451891237 | None | None | N |
V/K | 0.7114 | likely_pathogenic | 0.7369 | pathogenic | -0.775 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
V/L | 0.3572 | ambiguous | 0.3746 | ambiguous | -0.623 | Destabilizing | 0.898 | D | 0.368 | neutral | D | 0.523119404 | None | None | N |
V/M | 0.245 | likely_benign | 0.2528 | benign | -0.6 | Destabilizing | 0.995 | D | 0.673 | neutral | None | None | None | None | N |
V/N | 0.6037 | likely_pathogenic | 0.6281 | pathogenic | -0.565 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.7893 | likely_pathogenic | 0.8218 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
V/Q | 0.6108 | likely_pathogenic | 0.6444 | pathogenic | -0.788 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.6655 | likely_pathogenic | 0.6955 | pathogenic | -0.373 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
V/S | 0.4496 | ambiguous | 0.458 | ambiguous | -1.103 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
V/T | 0.3201 | likely_benign | 0.3301 | benign | -1.031 | Destabilizing | 0.983 | D | 0.575 | neutral | None | None | None | None | N |
V/W | 0.9365 | likely_pathogenic | 0.9391 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.7595 | likely_pathogenic | 0.7713 | pathogenic | -0.955 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.