Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29950 | 90073;90074;90075 | chr2:178553052;178553051;178553050 | chr2:179417779;179417778;179417777 |
N2AB | 28309 | 85150;85151;85152 | chr2:178553052;178553051;178553050 | chr2:179417779;179417778;179417777 |
N2A | 27382 | 82369;82370;82371 | chr2:178553052;178553051;178553050 | chr2:179417779;179417778;179417777 |
N2B | 20885 | 62878;62879;62880 | chr2:178553052;178553051;178553050 | chr2:179417779;179417778;179417777 |
Novex-1 | 21010 | 63253;63254;63255 | chr2:178553052;178553051;178553050 | chr2:179417779;179417778;179417777 |
Novex-2 | 21077 | 63454;63455;63456 | chr2:178553052;178553051;178553050 | chr2:179417779;179417778;179417777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.988 | D | 0.839 | 0.536 | 0.830956020592 | gnomAD-4.0.0 | 1.59494E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8595E-06 | 0 | 0 |
V/I | None | None | 0.704 | N | 0.547 | 0.201 | 0.466571191598 | gnomAD-4.0.0 | 6.84901E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65722E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2914 | likely_benign | 0.2741 | benign | -2.182 | Highly Destabilizing | 0.134 | N | 0.317 | neutral | N | 0.481099423 | None | None | N |
V/C | 0.8548 | likely_pathogenic | 0.8512 | pathogenic | -2.133 | Highly Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
V/D | 0.9914 | likely_pathogenic | 0.9893 | pathogenic | -2.577 | Highly Destabilizing | 0.988 | D | 0.839 | deleterious | D | 0.543286188 | None | None | N |
V/E | 0.9754 | likely_pathogenic | 0.9731 | pathogenic | -2.298 | Highly Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
V/F | 0.6742 | likely_pathogenic | 0.6099 | pathogenic | -1.291 | Destabilizing | 0.976 | D | 0.835 | deleterious | N | 0.517874097 | None | None | N |
V/G | 0.7127 | likely_pathogenic | 0.691 | pathogenic | -2.789 | Highly Destabilizing | 0.92 | D | 0.781 | deleterious | D | 0.54227223 | None | None | N |
V/H | 0.9921 | likely_pathogenic | 0.9905 | pathogenic | -2.553 | Highly Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
V/I | 0.0978 | likely_benign | 0.094 | benign | -0.454 | Destabilizing | 0.704 | D | 0.547 | neutral | N | 0.501973341 | None | None | N |
V/K | 0.9845 | likely_pathogenic | 0.9824 | pathogenic | -1.722 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.3123 | likely_benign | 0.3129 | benign | -0.454 | Destabilizing | 0.015 | N | 0.239 | neutral | N | 0.516033142 | None | None | N |
V/M | 0.3231 | likely_benign | 0.2948 | benign | -0.837 | Destabilizing | 0.982 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/N | 0.9636 | likely_pathogenic | 0.9567 | pathogenic | -2.207 | Highly Destabilizing | 0.997 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.9914 | likely_pathogenic | 0.9895 | pathogenic | -1.004 | Destabilizing | 0.991 | D | 0.832 | deleterious | None | None | None | None | N |
V/Q | 0.9685 | likely_pathogenic | 0.9642 | pathogenic | -1.93 | Destabilizing | 0.997 | D | 0.827 | deleterious | None | None | None | None | N |
V/R | 0.9747 | likely_pathogenic | 0.971 | pathogenic | -1.754 | Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
V/S | 0.7775 | likely_pathogenic | 0.7486 | pathogenic | -2.929 | Highly Destabilizing | 0.884 | D | 0.783 | deleterious | None | None | None | None | N |
V/T | 0.5679 | likely_pathogenic | 0.5431 | ambiguous | -2.473 | Highly Destabilizing | 0.939 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.995 | likely_pathogenic | 0.9927 | pathogenic | -1.734 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
V/Y | 0.967 | likely_pathogenic | 0.9571 | pathogenic | -1.375 | Destabilizing | 0.997 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.